FIG 10.

Sequence alignment of the ORF6 transcript ends with the CyHV-3 genome at ORF6 (NCBI accession no. NC_009127.1). The numbers before and after the sequence indicate the length of the genome that was imported from the complete consensus record. (A) 5′ RACE product mapped to the CyHV-3 genome. The numbers before and after the sequence indicate the length of the PCR product. The ATG start codon is shown underlined and in bold type. The underlined bases are predicted binding sites in the putative promoter region and can be cross-referenced in Table 2. (B) 3′ RACE product mapped to the CyHV-3 genome. The numbers before and after the sequence indicate the length of the PCR product. The TAA stop codon is shown underlined and in bold type. The predicted polyadenylation signal (AATAAA) is underlined. Alignments were performed using Geneious software.