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Maximum likelihood tree of aligned sequences (File S4) showing homology with Smp_089320. The tree is rooted with Clonorchis sinensis, branch lengths are numbers of substitutions/site, while % Bootstrap values (1000 replicates) are shown. The cluster containing the homologues of Smp_089320 in S haematobium (Sha) and S. japonicum (Sjp) is boxed, and is recovered using alternative phylogenetic methods (Fig S5A).
