Table 3.
Coordinate overexpression of probe sets representing MEF2-interacting genes.
| Gene
|
Fold-change (FC) comparison vs. normal adult
|
Relationship to MEF2
|
||||||
|---|---|---|---|---|---|---|---|---|
| FDR | All diseased (0; 0.056) |
DM-like/NMD (0; 0.015) |
DM1/DM2 (0; 0.011) |
Regulator | Target | Binding | U133 Plus probe set | Entrez nucleotide accession no. |
| ATP2A2 | 1.64 | 1.76 | 1.60 | Y | 212361_s_at | AW190070 | ||
| ATXN1 | 2.02 | 1.95 | 2.08 | Y | 203231_s_at | AW235612 | ||
| ATXN1 | 1.86 | 1.87 | 1.86 | Y | 203232_s_at | NM_000332 | ||
| MYH6 | 2.76 | 2.74 | 2.78 | Y | 214468_at | D00943 | ||
| MYOM1 | 1.91 | 2.02 | 1.81 | Y | 205610_at | NM_003803 | ||
| MYOM2 | 2.36 | 2.36 | 2.36 | Y | 205826_at | NM_003970 | ||
| MYOT | 2.12 | 2.14 | 2.11 | Y | 219728_at | NM_006790 | ||
| MYOT | 10.61 | 10.59 | 10.64 | Y | 242795_at | AA180060 | ||
| HDAC4 | 2.30 | 2.09 | 2.65 | Y | Y | 1558385_at | AL832806 | |
| NCOA2 | 1.81 | 1.83 | 1.81 | Y | Y | 212867_at | AI040324 | |
| NFAT5 | 1.69 | 1.70 | 1.69 | Y | 224984_at | W61007 | ||
| NFAT5 | 1.94 | 1.87 | 2.01 | Y | 242371_x_at | AW974747 | ||
| PPP3CA | 1.70 | NS | 1.83 | Y | 202425_x_at | NM_000944 | ||
| PPP3CA | 1.62 | NS | 1.87 | Y | 202457_s_at | AA911231 | ||
| PPP3CA | 1.73 | 1.58 | 1.68 | Y | 229606_at | AI827550 | ||
| PPP3CA | 5.23 | 5.03 | 5.42 | Y | 236545_at | AA532718 | ||
| MEOX2 | 2.27 | 2.59 | NS | Y | 206201_s_at | NM_005924 | ||
| GTF2IRD1 | 2.71 | 2.72 | 2.70 | Y | 221176_x_at | NM_025042 | ||
NS, not significant; FDR, false discovery rate (median FDR; 90th percentile FDR); Y, yes.