Table 1. Top Associations between SNVs and BMI-Related Traits.

Phenotype	n analyzed	Chr	SNV	position	context	nearest gene (s)	RA	AA	RAF	β	se	p-value
BMI	5,343	5	rs955423	165652228	intergenic	TENM2	A	C	0.610	0.335	0.066	3.45·10−7
BMI	5,343	4	rs3096490	110198580	intronic	COL25A1	G	A	0.529	0.317	0.063	5.32·10−7
BMI	5,343	5	rs1392280	165608261	intergenic	TENM2	G	A	0.659	0.332	0.067	6.90·10−7
BMI	5,343	15	rs1426654	46213776	exonic	SLC24A5	A	G	0.510	0.325	0.066	7.54·10−7
BMI	5,343	4	rs794149	110179691	intronic	COL25A1	A	G	0.521	0.314	0.064	8.36·10−7
BMI	5,343	4	rs3096483	110189985	intronic	COL25A1	T	C	0.524	0.313	0.063	8.37·10−7
Change in BMI	4,983	5	rs10041997	120226210	intergenic	PRR16,FTMT	A	G	0.518	0.138	0.027	4.40·10−7
Change in BMI	4,983	5	rs1347155	171901953	intergenic	SH3PXD2B,NEURL1B	T	C	0.042	0.341	0.068	4.97·10−7
Change in BMI	4,983	2	rs7565158	213302215	intergenic	ERBB4,MIR4776-2	A	C	0.495	0.136	0.027	6.34·10−7
Height	5,344	15	rs8042988	87213283	intronic	ACAN	A	G	0.621	0.006	0.001	3.81·10−7
Height	5,344	14	rs4898878	55462859	intergenic	LINC00520,PELI2	A	G	0.709	0.006	0.001	9.07·10−7
Underweight	4,474	14	rs12882679	78916991	intronic	NRXN3	G	A	0.687	0.057	0.012	9.57·10−7
Overweight	3,244	14	rs1475010	25206451	intergenic	STXBP6,NOVA1	C	A	0.307	0.060	0.012	5.74·10−7
Overweight	3,244	14	rs8181969	25214651	intergenic	STXBP6,NOVA1	C	A	0.305	0.059	0.012	8.49·10−7

AA: Alternative Allele; the allele associated with a decrease in the phenotype; BMI: Body Mass Index; Chr.: Chromosome; Overweight: BMI ≥23 kg/m²; compared to normal weight; Position: From build 36.1; RA: Risk allele; the allele associated with an increase in the phenotype; RAF: Risk Allele Frequency; SNV: Single Nucleotide Variant; se: Standard Error; Underweight: BMI <18.5 kg/m², compared to normal weight.