Table 2. Top Associations between SNVs and BMI-Related Traits, by Sex.

Phenotype	n analyzed	Chr	SNV	position	context	nearest gene (s)	RA	AA	RAF	β	se	p-value
BMI: Male	2,590	No variants were associated with a p-value less than 10−6
BMI: Female	2,753	15	rs1426654	46213776	exonic	SLC24A5	A	G	0.511	0.484	0.095	3.74·10−7
Height: Male	2,590	No variants were associated with a p-value less than 10−6
Height: Female	2,754	9	rs1331623	121239024	intergenic	DBC1,MIR147A	A	T	0.337	0.008	0.002	8.45·10−7
Underweight: Male	2,252	4	rs6833159	28441886	intergenic	MIR4275,PCDH7	T	C	0.735	0.087	0.017	2.99·10−7
Underweight: Female	2,222	No variants were associated with a p-value less than 10−6
Overweight: Male	1,444	15	rs12101726	92382946	intergenic	RGMA,MCTP2	C	A	0.195	0.101	0.019	2.42·10−7
Overweight: Male	1,444	6	rs1161397	50704412	intergenic	DEFB112,TFAP2D	A	G	0.105	0.127	0.026	9.45·10−7
Overweight: Male	1,444	6	rs280325	50743465	intergenic	DEFB112,TFAP2D	G	A	0.100	0.131	0.027	9.89·10−7
Overweight: Female	1,800	No variants were associated with a p-value less than 10−6
Change in BMI: Male	2,340	4	rs6447650	40075967	intergenic	CHRNA9,RBM47	T	C	0.044	0.416	0.080	2.39·10−7
Change in BMI: Female	2,643	1	rs347313	160570900	intronic	NOS1AP	G	A	0.322	0.249	0.044	2.32·10−8
Change in BMI: Female	2,643	1	rs347306	160569259	intronic	NOS1AP	G	A	0.324	0.241	0.044	5.37·10−8
Change in BMI: Female	2,643	5	rs1347155	171901953	intergenic	SH3PXD2B,NEURL1B	T	C	0.042	0.559	0.104	9.34·10−8
Change in BMI: Female	2,643	1	rs347282	160579377	intronic	NOS1AP	G	T	0.319	0.222	0.045	7.20·10−7

AA: Alternative Allele; the allele associated with a decrease in the phenotype; BMI: Body Mass Index; Chr.: Chromosome; Overweight: BMI ≥23 kg/m²; compared to normal weight; Position: From build 36.1; RA: Risk allele; the allele associated with an increase in the phenotype; RAF: Risk Allele Frequency; SNV: Single Nucleotide Variant; se: Standard Error; Underweight: BMI <18.5 kg/m², compared to normal weight.