Table 1.
List of the Ten SNPs with Largest Bayes Factors for Each of the Four Factors Obtained with the HGDP Data Set.
| Chromosome | rs Identifier | Physical Positiona | Closest Gene | Dist.b | Log10(BF)c | Factor No. |
|---|---|---|---|---|---|---|
| chr 10 | 4918664 | 94911055 | CYP26A1 | 83 | 2.8 | 1 |
| chr 10 | 10882168 | 94919424 | CYP26A1 | 92 | 2.7 | 1 |
| chr 10 | 7091054 | 95008434 | MYOF | 48 | 2.7 | 1 |
| chr 10 | 11187300 | 94910281 | CYP26A1 | 83 | 2.6 | 1 |
| chr 2 | 7556886 | 17771611 | SMC6 | 0 | 2.6 | 1 |
| chr 10 | 12220128 | 94965001 | MYOF | 91 | 2.5 | 1 |
| chr 10 | 6583859 | 94883463 | CYP26A1 | 56 | 2.5 | 1 |
| chr 10 | 4918924 | 94966946 | MYOF | 89 | 2.4 | 1 |
| chr 2 | 1834619 | 17764966 | SMC6 | 0 | 2.4 | 1 |
| chr 2 | 4578856 | 17716869 | SMC6 | 0 | 2.4 | 1 |
| chr 15 | 1834640 | 46179457 | SLC24A5 | 21 | 5.1 | 2 |
| chr 15 | 2250072 | 46172199 | SLC24A5 | 29 | 4.2 | 2 |
| chr 2 | 260714 | 108928927 | EDAR | 0 | 3.2 | 2 |
| chr 1 | 7531501 | 232404926 | SLC35F3 | 0 | 2.9 | 2 |
| chr 15 | 11637235 | 46420445 | DUT | 0 | 2.9 | 2 |
| chr 9 | 10760260 | 124753347 | RABGAP1 | 0 | 2.9 | 2 |
| chr 9 | 2416899 | 125054924 | STRBP | 0 | 2.8 | 2 |
| chr 5 | 2406410 | 132093779 | KIF3A | 0 | 2.8 | 2 |
| chr 15 | 3751631 | 50321636 | MYO5C | 0 | 2.8 | 2 |
| chr 9 | 618746 | 124777344 | RABGAP1 | 0 | 2.8 | 2 |
| chr 22 | 139553 | 40517145 | MEI1 | 0 | 4.1 | 3 |
| chr 22 | 5996039 | 40311903 | PMM1 | 0 | 4.0 | 3 |
| chr 22 | 8139993 | 40325281 | DESI1 | 0 | 4.0 | 3 |
| chr 22 | 126092 | 40508387 | MEI1 | 0 | 4.0 | 3 |
| chr 22 | 1005402 | 39621676 | XPNPEP3 | 0 | 3.6 | 3 |
| chr 22 | 8137373 | 40059162 | ZC3H7B | 0 | 3.6 | 3 |
| chr 22 | 133074 | 39408419 | MCHR1 | 0 | 3.6 | 3 |
| chr 22 | 9611613 | 40291777 | CSDC2 | 0 | 3.5 | 3 |
| chr 20 | 2424641 | 24665867 | SYNDIG1 | 71 | 3.5 | 3 |
| chr 14 | 2600814 | 46054248 | LINC00871 | 13 | 3.5 | 3 |
| chr 8 | 16892216 | 120271074 | MAL2 | 19 | 2.8 | 4 |
| chr 8 | 6990312 | 110671493 | SYBU | 0 | 2.8 | 4 |
| chr 17 | 9908046 | 50918781 | MMD | 64 | 2.7 | 4 |
| chr 17 | 575873 | 39055489 | MEOX1 | 18 | 2.6 | 4 |
| chr 4 | 4691075 | 164468935 | NPY1R | 0 | 2.6 | 4 |
| chr 17 | 4471745 | 50923883 | MMD | 70 | 2.5 | 4 |
| chr 14 | 12891534 | 80069114 | CEP128 | 0 | 2.5 | 4 |
| chr 8 | 6988341 | 110653602 | SYBU | 2 | 2.5 | 4 |
| chr 8 | 12216712 | 9933221 | MSRA | 16 | 2.5 | 4 |
| chr 17 | 11869714 | 45942306 | MYCBPAP | 0 | 2.5 | 4 |
aThe positions are given for the NCBI36 assembly.
bDist. is the distance from the closest gene and is measured in kilobase pairs.
cLog10(BF) is the logarithm (in base 10) of the Bayes factor.