Table 1.
Polymorphism and Divergence of GSC Regulating Genes in Drosophila ananassae BKK and BOG Population.
Synonymous |
Nonsynonymous |
||||||||
---|---|---|---|---|---|---|---|---|---|
Gene | n | S | θ | π | KJC | θ | π | KJC | FST |
bam | |||||||||
BKK | 14 | 8 | 0.0076 | 0.0094 | 0.326 | 0.0003 | 0.0001 | 0.049 | 0.03 |
BOG | 9 | 9 | 0.0089 | 0.0095 | 0.320 | 0.0007 | 0.0006 | 0.049 | |
bgcn | |||||||||
BKK | 13 | 101 | 0.0346 | 0.0368 | 0.289 | 0.0017 | 0.0018 | 0.012 | 0.10 |
BOG | 10 | 96 | 0.0369 | 0.0375 | 0.294 | 0.0012 | 0.0012 | 0.012 | |
nos | |||||||||
BKK | 14 | 42 | 0.0198 | 0.0154 | 0.260 | 0.0022 | 0.0019 | 0.026 | 0.05 |
BOG | 5 | 16 | 0.0106 | 0.0111 | 0.253 | 0.0011 | 0.0009 | 0.026 | |
ote | |||||||||
BKK | 14 | 64 | 0.0482 | 0.0548 | 0.244 | 0.0053 | 0.0052 | 0.033 | −0.05 |
BOG | 4 | 44 | 0.0454 | 0.0431 | 0.226 | 0.0040 | 0.0039 | 0.034 | |
pum | |||||||||
BKK | 11 | 37 | 0.0267 | 0.0252 | 0.143 | 0 | 0 | 0.005 | — |
stwl | |||||||||
BKK | 14 | 78 | 0.0229 | 0.0226 | 0.278 | 0.0040 | 0.0031 | 0.082 | 0.12 |
BOG | 7 | 47 | 0.0178 | 0.0176 | 0.282 | 0.0028 | 0.0023 | 0.082 | |
Yb | |||||||||
BKK | 10 | 103 | 0.0239 | 0.0216 | 0.470 | 0.0039 | 0.0041 | 0.156 | — |
Average | |||||||||
BKK | — | — | 0.0262 | 0.0266 | 0.2872 | 0.0025 | 0.0023 | 0.0520 | — |
BOG | — | — | 0.0239 | 0.0238 | 0.2748 | 0.0020 | 0.0018 | 0.0404 | — |
Note.—n, the sample size examined; S, the number of segregating sites; Θ, polymorphism measured as Watterson’s theta; π, polymorphism measured as average pairwise differences; KJC, average nucleotide difference between D. ananassae and D. atripex with Jukes–Cantor correction; FST, fixation index for measuring genetic differentiation between the BKK and BOG population.