Table 1. Type of Sequencing Performed on HCC at the HGSC.
Type of Sequencing | Number of Samples Sequenced | Platform |
---|---|---|
Whole Genome Sequencing | 2 | Applied Biosystems SOLiD, Illumina Solexa, Pacific BioSciences |
Whole Exome Sequencing | 47 | Applied Biosystems SOLiD |
Gene Specific Analysis | 94* | Sanger |
Gene Expression | 4 | Applied Biosystems SOLiD, Illumina Solexa |
Epigenetic Analysis | 1 | Illumina Solexa |
During gene specific analysis, 28 genes were analyzed in our 94 paired samples.