Table 1. Comparison between the simulation and experiment metabolic concentrations in Synechococcus 7942 cells grown at high and low CO2.
high CO2 | 3PGA | 2PGA | PEP | F6P | G6P | FBP | DHAP | 2PG | GLY | SER | OXA | unit |
experiment | 4.99 | 0.13 | 0.21 | 2.51 | 3.63 | 0.02 | 0.01 | 0.37 | 0.83 | 1.06 | 1.80 | mM |
simulation | 4.61 | 0.16 | 0.23 | 2.22 | 2.77 | 0.03 | 0.03 | 0.33 | 0.86 | 1.12 | 1.94 | mM |
low CO2 | 3PGA | 2PGA | PEP | F6P | G6P | FBP | DHAP | 2PG | GLY | SER | OXA | unit |
experiment | 13.00 | 0.62 | 0.98 | 3.00 | 4.05 | 0.07 | 0.01 | 0.33 | 1.11 | 1.34 | 1.29 | mM |
simulation | 13.46 | 0.47 | 0.72 | 3.38 | 4.19 | 0.07 | 0.03 | 0.29 | 1.15 | 1.21 | 1.40 | mM |
3PGA–3-phosphoglycerate, 2PGA–2-phospohoglycerate, PEP–phosphoenolpyruvate, F6P–fructose 6-phosphate, G6P–glucose 6-phosphate, FBP–fructose 1,6-bisphosphate, DHAP–dihydroxyacetone phosphate, 2PG–2-phosphoglycolate, GLY–glycine, SER–serine, OXA–oxalate. All values were rounded to the nearest second decimal.