Table 2. Putative chloroplast localized CCV AP1 complex components identified using characteristic domains in searches of the TAIR chloroplast dataset.
Name (ARAMEMNON), Accession No., subunit | Role of chloroplast protein (TAIR) | SigConsens (ARAMEMNON) | SUBA | Chloroplast 2010 | ||
CP | MT | SEC | ||||
Putative clathrin AP1 complex protein | ||||||
Putative gamma subunit of coatomer adaptor complex At4g34450*, β1 | Cytoskeleton organization, protein transport, catabolic processes, vesicle transport | 0.4 | 0.0 | 4.0 | No | No |
Unknown protein At1g51350*, β1 | Unknown | 20.4 | 0.0 | 3.9 | No | Yes |
Putative ascorbate peroxidase At1g07890, γ | Golgi organization, glycolysis, hyperosmotic response, photorespiration, protein folding (is a ascorbate peroxidase) | 0.8 | 9.0 | 0.0 | No | Yes |
AttAPX At1g77490, γ | Chloroplast-nucleus signalling, thylakoid membrane organization (is a ascorbate peroxidase) | 22.8 | 5.0 | 4.9 | Yes (MS/MS) | Yes |
AtRNEE/G At2g04270, γ | Chloroplast mRNA processing, chloroplast organisation, thylakoid membrane organization (is a ribonuclease) | 11.2 | 4.3 | 0.4 | Yes (MS/MS) | Yes |
AtsAPX At4g08390, γ | Oxidation-reduction processes (is a ascorbate peroxidase) | 17.0 | 5.3 | 2.2 | Yes (MS/MS and GFP) | Yes |
AtAPX3 At4g35000, γ | Oxidation-reduction processes (is a ascorbate peroxidase) | 0.0 | 5.8 | 0.0 | Yes (MS/MS) | Yes |
*contains common occurring domain(s); CP, chloroplast; MT, mitochondria; SEC, secretory pathway.