Table 7. Putative chloroplast localized CCV and COPI Coat GTPase components identified using characteristic domains in searches of the TAIR chloroplast dataset.
Name (ARAMEMNON), Accession No. | Role of chloroplast protein (TAIR) | SigConsens (ARAMEMNON) | SUBA | Chloroplast 2010 | ||
CP | MT | SEC | ||||
Putative Coat GTPases | ||||||
AtSARA1A, At1g09180* | Intracellullar transport | 0.4 | 0.0 | 19.9 | Yes (MS/MS) | Yes |
AtRabA5e, At1g05810* | Protein transport, GTP mediated signalling | 19.2 | 1.2 | 2.8 | No | Yes |
AtRabB1c, At4g35860* | Protein transport, vesicle transport, protein targeting to the vacuole | 0.0 | 0.0 | 5.9 | Yes (MS/MS) | Yes |
Putative GTPase of unknown function, At5g57960* | GTP binding | 17.3 | 1.4 | 0.0 | Yes (MS/MS) | Yes |
*contains common occurring domain(s); CP, chloroplast; MT, mitochondria; SEC, secretory pathway.