Table 8. Overview of putative chloroplast localized proteins in rice (subsp. Japonica) with characteristic domains of CCV and COPI subunit counterparts.
Subunits | Putative chloroplast localized proteins holding domains characteristics for each subunit respectively |
CCV | |
Clathrin heavy chain | Clathrin heavy chain 1 (LOC_Os11g01380), Clathrin heavy chain 2 (LOC_Os12g01390) |
AP1 γ subunit | Probable L-ascorbate peroxidase 7 (APX7) (LOC_Os04g35520), Probable L-ascorbate peroxidase 8 (APX8) (LOC_Os02g34810) |
AP1 β1 subunit | Armadillo/beta-catenin-like repeat family protein (LOC_Os11g41990)*, Adaptin, putative (LOC_Os01g43630)*, AP-3 complex subunit delta (LOC_Os01g32880)* |
AP2 β2 subunit | Armadillo/beta-catenin-like repeat family protein (LOC_Os11g41990)*, Carbamoyl-phosphate synthase large chain (CARB) (LOC_Os01g38970), Acetyl-CoA carboxylase 2 (ACC2) (LOC_Os05g22940), Adaptin, putative (LOC_Os01g43630)*, AP-3 complex subunit delta (LOC_Os01g32880)* |
AP2 μ2 subunit | Adaptor complexes medium subunit family protein (LOC_Os12g34370)* |
AP3 δ subunit | Armadillo/beta-catenin-like repeat family protein (LOC_Os11g41990)*, Adaptin, putative (LOC_Os01g43630)*, AP-3 complex subunit delta (LOC_Os01g32880)* |
AP3 β3 subunit | Armadillo/beta-catenin-like repeat family protein (LOC_Os11g41990)*, Adaptin, putative (LOC_Os01g43630)*, AP-3 complex subunit delta (LOC_Os01g32880)* |
AP3 μ3 subunit | Adaptor complexes medium subunit family protein (LOC_Os12g34370)* |
AP4 β4 subunit | Adaptin, putative (LOC_Os01g43630)* |
AP4 ε subunit | Armadillo/beta-catenin-like repeat family protein (LOC_Os11g41990)*, Adaptin, putative (LOC_Os01g43630)*, AP-3 complex subunit delta (LOC_Os01g32880)* |
AP5 μ5 subunit | Adaptor complexes medium subunit family protein (LOC_Os12g34370)* |
COPI | |
B-COPI α-subunit | Guanine nucleotide-binding protein subunit beta (LOC_Os03g46650)* |
B-COPI β′-subunit | Guanine nucleotide-binding protein subunit beta (LOC_Os03g46650)*, Regulatory-associated protein of TOR 1 (RAPTOR1) (LOC_Os12g01922) |
B-COPI ε-subunit | PPR repeat containing protein (LOC_Os07g14530) |
F-COPI δ subunit | Adaptor complexes medium subunit family protein (LOC_Os12g34370)* |
F-COPI ζ-subunit | Magnesium-chelatase subunit ChlD (LOC_Os03g59640) |
Coat GTPases | |
ArfA group | Mitochondrial Rho GTPase (LOC_Os03g59590)* |
ArfB group | Mitochondrial Rho GTPase (LOC_Os03g59590)* |
ArfB2 group | Mitochondrial Rho GTPase (LOC_Os03g59590)* |
ArfD group | Mitochondrial Rho GTPase (LOC_Os03g59590)* |
* = proteins with several assigned roles, having common occurring domains.