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. Author manuscript; available in PMC: 2015 Jul 1.
Published in final edited form as: J Comput Aided Mol Des. 2014 Jun 24;28(7):765–778. doi: 10.1007/s10822-014-9758-7

Table 1.

Calculated binding free energies of D-chicoric acid and lomofungin at the exosites of BoNT/A.

Probe Binding Cluster Binding site Binding mode ΔG (kcal/mol)
D-chicoric acid Cluster 1 α-exosite 1 −32.6
2 −22.0
3 −23.7
Cluster 2 β-exosite (A) 1 −17.3
2 −27.1
3 −8.1
Cluster 3 anchor exosite 1 −26.6
2 −15.9
3 −11.0
lomofungin Cluster 1 β-exosite (A) 1 −22.5
2 −22.0
3 −13.7
Cluster 2 β-exosite (B) 1 −21.1
2 −20.9
3 −10.8
Cluster 3 anchor exosite 1 −12.8
2 −15.5
3 −16.1