Table 2.
Effect of the CRHR1 SNP Genotype × Stress interaction on the likelihood of alcohol dependence diagnosis
CRHR1
SNP |
Chromosomal
Position * |
CRHR1
Location |
MAF |
HWE
p-value |
Base
variation |
p-value |
---|---|---|---|---|---|---|
rs4792886 | 41232603 | intron | 0.096 | 0.837 | G > A | 0.498 |
rs110402 | 41235818 | intron | 0.461 | 0.087 | C > T | 0.019 |
rs242924 | 41241147 | intron | 0.461 | 0.139 | C > A | 0.019 |
rs242942 | 41247413 | intron | 0.110 | 0.730 | G > A | 0.408 |
rs3785877 | 41247968 | intron | 0.041 | 0.074 | G > A | 0.269 |
rs171440 | 41249267 | intron | 0.487 | 0.558 | C > T | 0.056 |
rs242939 | 41251360 | intron | 0.070 | 0.796 | A > G | 0.912 |
rs4566211 | 41251477 | intron | 0.218 | 0.496 | G > A | 0.150 |
rs242936 | 41254990 | intron | 0.104 | 0.769 | C > T | 0.623 |
rs17762954 | 41255567 | intron | 0.218 | 0.418 | C > T | 0.175 |
rs173365 | 41256855 | intron | 0.429 | 0.811 | C > T | 0.026 |
rs1396862 | 41258778 | intron | 0.218 | 0.496 | C > T | 0.150 |
rs17763086 | 41261262 | intron | 0.218 | 0.511 | T > G | 0.141 |
rs17763104 | 41261576 | intron | 0.119 | 0.534 | G > A | 0.908 |
rs16940665 | 41263677 | coding | 0.218 | 0.458 | T > C | 0.143 |
rs17689918 | 41265869 | intron | 0.218 | 0.537 | G > A | 0.147 |
rs17689966 | 41266236 | intron | 0.428 | 0.738 | A > G | 0.018 |
rs1876829 | 41267224 | intron | 0.222 | 0.608 | A > G | 0.095 |
rs16940686 | 41268811 | 3UTR | 0.040 | 0.153 | G > T | 0.223 |
Note:
Genome Build 36.3.
Significant traumatic stress × CRHR1 SNP interactions are bolded.