Table 1.
DNA sequencing of the ECTV-Naval and the ECTV-Cornell genomes.
| ECTV-Naval |
ECTV-Cornell | |||
|---|---|---|---|---|
| Sanger | 454-Roche | Illumina | 454-Roche | |
| Total reads | 5810 | 92,155 | 5,497,834 | 67,965 |
| Mapped reads (%)a | nd | 45,195 | 4,835,589 | 58,558 |
| (49.0%) | (87.9%) | (86.1%) | ||
| Average reads size (bp) | 536 | 360 | 76 | 384 |
| Genome coverage (x) | 13 | 83 | 1770 | 115 |
| Genome size (bp) | 207,620 | 204,099 | 207,620 | 204,499 |
| Differences with Sanger genome b | – | 8 | 0 | nd |
nd, not determined.
a
Number of reads mapped to the reference viral genome .
b
Number of nucleotide differences as compared to the Sanger genome.