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. 2014 Aug 20;9(8):e105067. doi: 10.1371/journal.pone.0105067

Table 1. Statistics on vFam performance on metagenomic datasets.

Virus Dataset Total Reads Positive Reads (%) TP FP Precision FPR TPR TPR/FPR
Human klassevirus 1 533,453 483 (0.09%) 358 9,957 3.47% 1.87% 74.12% 39.7
Santeuil nodavirus 20,787 2,493 (11.99%) 542 201 72.95% 1.10% 21.74% 19.8
CAS virus 19,196,993 122,911 (0.64%) 5,369 14,952 26.42% 0.08% 4.37% 55.7

Results for viral detection of Human klassevirus 1, Santeuil nodavirus, and CAS virus. TP = True Positives, FP = False Positives, Precision = TP/(TP+FP), TPR = TP/Positive Reads, FPR = FP/(Total Reads–Positive Reads); TP and FP determined from maximal values in Figures 4B, 4D, and 4F.