Table 2. Picocyanobacterial reference genomes used for comparisons.
| Name | Abbreviation | Subcluster | Pigment type | Isolation source | Reference/institute |
|---|---|---|---|---|---|
| Synechococcus sp. WH 7803 | WH7803 | 5.1 | IIIa | Sargasso Sea | Dufresne et al. (2008) |
| Synechococcus sp. CC9605 | CC9605 | 5.1 | IIIc | California Current | Dufresne et al. (2008) |
| Synechococcus sp. WH 8102 | WH8102 | 5.1 | IIIc | Tropical Atlantic | Palenik et al. (2003) |
| Synechococcus sp. CC9311 | CC9311 | 5.1 | IIId | California Current | Palenik et al. (2006) |
| Synechococcus sp. CC9902 | CC9902 | 5.1 | IIId | California Current | Dufresne et al. (2008) |
| Synechococcus sp. RS9916 | RS9916 | 5.1 | IIId | Red Sea | Dufresne et al. (2008) |
| Synechococcus sp. BL107 | BL107 | 5.1 | IIId | Blanes Bay, Mediterranean Sea | Dufresne et al. (2008) |
| Synechococcus sp. WH 7805 | WH7805 | 5.1 | II | Sargasso Sea | Dufresne et al. (2008) |
| Synechococcus sp. RS9917 | RS9917 | 5.1 | I | Red Sea | Dufresne et al. (2008) |
| Synechococcus sp. WH 8016 | WH8016 | 5.1 | Woods Hole | JGI | |
| Synechococcus sp. WH 8109 | WH8109 | 5.1 | Sargasso Sea | JCVI | |
| Synechococcus sp. CC9616 | CC9616 | 5.1 | California Current | JGI | |
| Synechococcus sp. RCC307 | RCC307 | 5.3 | IIIb | Mediterranean Sea | Dufresne et al. (2008) |
| Synechococcus sp. CB0205 | CB0205 | 5.2 | Chesapeake Bay | JCVI | |
| Synechococcus sp. CB0101a | CB0101 | 5.2 | Chesapeake Bay | JCVI | |
| Synechococcus sp. WH 5701 | WH5701 | 5.2 | I | Long Island Sound | Dufresne et al. (2008) |
| Cyanobium gracile PCC 6307 | PCC6307 | 5.2 | I | Freshwater | Shih et al. (2013) |
| Cyanobium sp. PCC 7001 | PCC7001 | 5.2 | I | Long Island Sound | JCVI |
Abbreviations: JCVI, J Craig Venter Institute, USA; JGI, Joint Genome Institute, USA; PBS, phycobilisomes.
a
Not used for PBS analysis.