Extended Data Table 4.
List of primers used for RT-qPCR and oligonucleotides for shRNA constructs.
RT-qPCR | |||
---|---|---|---|
Genes | Forward Sequence | Reverse Sequence | Accession Number |
Acaca/ Acc1 |
CGCTCGTCAGGTTCTTATTG | TTTCTGCAGGTTCTCAATGC | NM_133360.2 |
Fasn | TCCTGGAACGAGAACACGATCT | GAGACGTGTCACTCCTGGACTTG | NM_007988.3 |
Scd1 | CTTCTTCTCTCACGTGGGTTG | CGGGCTTGTAGTACCTCCTC | NM_009127.4 |
Dgat1 | CATGCGTGATTATTGCATCC | ACAGGTTGACATCCCGGTAG | NM_010046.2 |
Rev-erbα | TCTCTCCGTTGGCATGTCTAGA | GCAAGCATCCGTTGCTTCTC | X86010.1 |
Cd36 | TCATATTGTGCTTGCAAATCCAA | TGTAGATCGGCTTTACCAAAGATG | NM_001159558.1 |
Fabp4 | TCACCGCAGACGACAGGAA | CCACCAGCTTGTCACCATCTC | NM_024406.2 |
Fatp4 | CATCAGCGTAAATGGGGATTTGG | CTGTCGTCTGCGGTGATTTCATC | AJ251113.1 |
Cidea | TGCTCTTCTGTATCGCCCAGT | GCCGTGTTAAGGAATCTGCTG | NM_007702.2 |
Ppara | TGTTTGTGGCTGCTATAATTTGC | GCAACTTCTCAATGTAGCCTATGTTT | NM_011144.6 |
Fabp3 | ACCTGGAAGCTAGTGGACAG | TGATGGTAGTAGGCTTGGTCAT | NM_010174.1 |
Fatp1 | CGCTTTCTGCGTATCGTCTG | GATGCACGGGATCGTGTCT | NM_011977.3 |
Per1 | CCAGCGTGTCATGATGACATAC | CTCTCCCGGTCTTGCTTCAG | AF543843.2 |
Cry1 | CACTGGTTCCGAAAGGGACTC | CTGAAGCAAAAATCGCCACCT | NM_007771.3 |
Arntl /Bmal1 |
TCAAGACGACATAGGACACCT | GGACATTGGCTAAAACAACAGTG | NM_007489.4 |
Rplp0/ 36b4 |
AGATGCAGCAGATCCGCAT | GTTCTTGCCCATCAGCACC | NM_007475.5 |
Ppard | CAGCCTCAACATGGAATGTC | TCCGATCGCACTTCTCATAC | NM 011145.3 |
Acadm/ Mcad |
TTTCGAAGACGTCAGAGTGC | TGCGACTGTAGGTCTGGTTC | NM_007382.5 |
shRNA | ||
---|---|---|
Gene | Sequence | Accession Number |
Cd36 | GGGAAGTTGTCCTTGAAGA | NM_001159558.1 |
Ppara | CCCTTATCTGAAGAATTCTTA | NM_011144.6 |