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. Author manuscript; available in PMC: 2014 Aug 25.
Published in final edited form as: Virology. 2012 Nov 7;436(1):75–80. doi: 10.1016/j.virol.2012.10.023

Table 2.

Nucleotide and amino acid divergence between El Paso and Cuidad Juarez WNV isolatesa

Group 1 Group 2 Group 3
Strain NY99 TM171-03 TX5282 TX7465 TX5718 TX6866 TX5947 TX6115 TX2686 TX6745 TX6572
NY99 - 0.41 0.61 0.64 0.65 0.43 0.46 0.54 0.41 0.39 0.53
TM171-03 0.09 - 0.87 0.89 0.92 0.69 0.73 0.81 0.67 0.63 0.77
TX5282 0.32 0.44 - 0.15 0.06 0.74 0.78 0.86 0.72 0.68 0.82
TX7465 0.26 0.38 0.12 - 0.19 0.79 0.83 0.92 0.76 0.76 0.90
TX5718 0.41 0.52 0.09 0.20 - 0.80 0.83 0.92 0.79 0.75 0.89
TX6866 0.26 0.38 0.52 0.47 0.61 - 0.07 0.17 0.53 0.52 0.65
TX5947 0.26 0.38 0.52 0.47 0.61 0.06 - 0.19 0.56 0.56 0.70
TX6115 0.35 0.47 0.61 0.55 0.70 0.15 0.09 - 0.64 0.63 0.76
TX2686 0.20 0.35 0.38 0.35 0.50 0.35 0.35 0.44 - 0.33 0.46
TX6745 0.15 0.26 0.29 0.23 0.38 0.29 0.29 0.38 0.17 - 0.26
TX6572 0.26 0.38 0.47 0.41 0.55 0.41 0.41 0.47 0.29 0.17 -
a

Percent nucleotide divergence from NY99 and TM171-03 is indicated above the diagonal with amino acid divergence shown below the diagonal. Sequences with high nucleotide and/or amino acid similarity are annotated in bold.