Table 2. Differences in transcriptional regulation between NTAL KO and WT cells.
Biological processes different in NTAL KO vs WT cells | Molecular functions different in NTAL KO vs WT cells | ||||
Biological process | Genes in non-activated cells | Genes in activated cells | Molecular function | Genes in non-activated cells | Genes in activated cells |
metabolic processes | 24 | 17 | nucleotide binding | 38 | 41 |
biosythetic processes | 15 | 2 | protein binding | 21 | 31 |
transcription and its regulation | 12 | 15 | DNA binding | 14 | 20 |
mRNA/rRNA processing and translation | 11 | 2 | catalytic activity | 12 | 5 |
transport | 11 | 3 | RNA binding | 8 | 1 |
protein phosphorylation and dephosphorylation | 8 | 9 | nucleic acid binding | 7 | 5 |
cell cycle | 7 | 14 | receptor and signal transducer activity | 6 | 3 |
ATP catabolic process | 5 | 5 | binding | 5 | 5 |
DNA replication | 5 | 6 | magnesium ion binding | 4 | 0 |
apoptosis | 4 | 5 | phosphoprotein phosphatase activity | 4 | 2 |
signal transduction | 4 | 6 | chromatin binding | 2 | 0 |
mitosis | 3 | 9 | peptidyl-prolyl cis-trans isomerase activity | 2 | 1 |
DNA repair | 3 | 7 | actin binding | 2 | 3 |
protein folding | 3 | 1 | serine-type endopeptidase inhibitor activity | 2 | 1 |
microtubule organization and depolymerization | 1 | 4 | iron ion binding | 2 | 1 |
cell proliferation | 0 | 4 | calcium ion binding | 2 | 0 |
ubiquitin-dependent processes | 0 | 4 | structural molecule activity | 1 | 2 |
cytokinesis and cytokine production | 0 | 4 | ubiquitin thiolesterase activity | 0 | 2 |
other process | 51 | 31 | other function | 44 | 28 |
unknown process | 42 | 46 | unknown function | 33 | 43 |
total number of genes | 209 | 194 | total number of genes | 209 | 194 |