Table 3.
Rank | GWAS SNPs | Agilent | Illumina | NimbleGen | ||||||||
SNP | p Value | Function | SNP | p Value | Function | SNP | p Value | Function | SNP | p Value | Function | |
1 | 9:15472139 | 7.5E-07 | Intronic | 7:11022564 | 8.8E-07 | Exonic | 7:11022564 | 8.8E-07 | Exonic | 7:11022564 | 8.8E-07 | Exonic |
2 | 7:11022564 | 8.8E-07 | Exonic | 7:11022230 | 1.0E-06 | Exonic | 7:11022230 | 1.0E-06 | Exonic | 7:11022230 | 1.0E-06 | Exonic |
3 | 7:11008221 | 1.0E-06 | Intergenic | 9:15468480 | 4.4E-06 | Intronic | 7:94927677 | 2.9E-06 | UTR3 | 9:15571630 | 3.2E-05 | Exonic |
4 | 7:11022230 | 1.0E-06 | Exonic | 7:41661724 | 2.9E-05 | Intergenic | 7:94921491 | 8.3E-06 | UTR3 | 9:14863863 | 7.2E-05 | Exonic |
5 | 7:11015444 | 1.1E-06 | Intronic | 9:15571630 | 3.2E-05 | Exonic | 9:15571630 | 3.2E-05 | Exonic | 3:125859012 | 7.4E-05 | Intronic |
6 | 9:15528290 | 1.1E-06 | Intergenic | 3:184766392 | 3.9E-05 | Intronic | 3:184770380 | 3.9E-05 | UTR3 | 17:64210580 | 7.5E-05 | Exonic |
7 | 9:15443430 | 1.4E-06 | Intronic | 3:184769911 | 4.5E-05 | UTR3 | 3:184769911 | 4.5E-05 | UTR3 | 7:44608718 | 7.9E-05 | Intronic |
8 | 9:15469733 | 1.7E-06 | Intronic | 3:184769941 | 4.5E-05 | UTR3 | 3:184769941 | 4.5E-05 | UTR3 | 1:212798260 | 1.0E-04 | Exonic |
9 | 3:106199956 | 2.2E-06 | Intergenic | 9:14863863 | 7.2E-05 | Exonic | 7:94921543 | 6.8E-05 | UTR3 | 1:210761365 | 1.2E-04 | Exonic |
10 | 9:15446868 | 2.3E-06 | Intronic | 17:64210580 | 7.5E-05 | Exonic | 9:14863863 | 7.2E-05 | Exonic | 7:2414142 | 1.2E-04 | Intronic |