Table 3.
Breakdown of SSR repeats present in the red clover transcriptome assembly
| SSR data | |
|---|---|
| Number of seqs searched | 45181 |
| Total size of sequences (bp) | 41 943 532 |
| Number of SSRs | 3127 |
| Number of SSR containing seqs | 2744 |
| Number of seqs containing more than one SSR | 322 |
| Number of compound SSRs | 192 |
| Distribution of SSR repeat types | |
| Di-nucleotides (≥8 repeats) | 907 (29%) |
| Tri-nucleotides (≥6 repeats) | 1879 (60%) |
| Tetra-nucleotides (≥5 repeats) | 235 (7%) |
| Penta-nucleotides (≥5 repeats) | 53 (2%) |
| Hexa-nucleotides (≥5 repeats) | 51 (2%) |