Table 1.
Statistics of small RNA sequences in all four libraries.
| Library | Tag counts after removing low quality sequences | Average length of tags (nt) | Tags annotated to miRBase | Number of ESTs matched to annotated tags | Number of ESTs after BLASTX and Rfam searches | Real precursor miRNAs conformed by SVM |
|---|---|---|---|---|---|---|
| S-M | 4,949,795 | 29.5 | 258 | 3253 | 1178 | 42 |
| S-PI | 4,712,304 | 29.3 | 432 | 4750 | 2293 | 43 |
| R-M | 3,384,144 | 28.6 | 185 | 1730 | 694 | 30 |
| R-PI | 3,021,557 | 28.4 | 368 | 4021 | 1298 | 27 |