Table 1.
Culture and strain information for novel sequences used in this study.
| Binomial | Strain | Assembler | Temperature | Media | Sequencing type | Number of paired reads (millions) |
|---|---|---|---|---|---|---|
| Akashiwo sanguinea | Trinity | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 104a | |
| Amoebophrya sp. ex A. sanguinea | Trinity | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 104a | |
| Amoebophrya sp. ex K. veneficum | Trinity | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 76a | |
| Amphidinium carterae | CCMP1314 | Trinity | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 30 |
| Crypthecodinium cohnii | ATCC30340 | Newbler | 454 | |||
| Hematodinium sp. ex Nephrops norvegicus | Trinity, MIRA | 12 | NS/FCS | 454/Illumina 100 base paired end | ||
| Karlodinium veneficum | CCMP1974 | Trinity | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 76a |
| Polarella glacialis | CCMP1383 | Trinity | 4 | L1 @ 15 ppt | Illumina 76 base paired end | 34 |
| Prorocentrum sp. | CCMP3122 | Abyss | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 55 |
| Prorocentrum hoffmannianum | CCMP683 | Abyss | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 50 |
| Prorocentrum micans | CCMP1589 | Abyss | 20 | L1 @ 15 ppt | Illumina 100 base paired end | 50 |
a
Combined sequencing of host and parasite.