Table 2.
Examples of developmental regulators that were identified by DGE to be differentially expressed in the fruit spines of tbh mutant and WT
| Gene ID | Gene name | Fold change | P value |
|---|---|---|---|
| Meristem maintenance and regulation | |||
| Csa4G297540 | RPL (REPLUMLESS) | 3.6 | 5.0E–04 |
| Csa3G144740 | ZLL (ZWILLE) | 2.0 | 1.9E–03 |
| Csa1G064670 | ATML1 (MERISTEM LAYER 1) | 3.2 | 1.6E–05 |
| Csa6G497080 | BAM1 (BARELY ANY MERISTEM 1) | 1.8 | 3.3E–03 |
| Csa1G536820 | ARF6 (AUXIN RESPONSE FACTOR 6) | 1.9 | 1.9E–03 |
| Csa4G256430 | BOP2 (BLADE ON PETIOLE2) | 2.7 | 2.9E–03 |
| Csa3G736760 | AP2 (APETALA 2) | 2.6 | 1.1E–04 |
| Csa5G118190 | LPR1 (Low Phosphate Root1) | 2.5 | 2.5E–04 |
| Sequence-specific DNA-binding transcription factor activity | |||
| Csa4G645830 | KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) | 3.1 | 7.7E–05 |
| Csa4G638510 | MYB77 (myb domain protein 77) | 2.9 | 2.5E–07 |
| Csa3G812750 | MYB105 (myb domain protein 105) | 3.2 | 1.7E–04 |
| Csa3G354520 | SPCH (SPEECHLESS) | 2.6 | 1.2E–04 |
| Csa3G809420 | SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9) | 2.2 | 4.7E–04 |
| Csa2G369820 | ATHB22 (HOMEOBOX PROTEIN 22) | 2.1 | 6.9E–04 |
| Csa2G021550 | bHLH family protein (bHLH096) | 2.1 | 8.5E–04 |
| Csa5G636510 | AtHB34 (ARABIDOPSIS THALIANA HOMEOB-OX PROTEIN 34) | 2.1 | 3.3E–04 |