Table 2. Nucleotide diversity (π) and haplotype diversity (Hd) of miRNA populations.
miRNA | miR-#-3p (dominant) | Loop sequences | miR-#-5p | |||
π | Hd | π | Hd | π | Hd | |
miR-23a | 0.002±0.002 | 0.047±0.044 | 0.618±0.030 | 0.939±0.018 | 0.157±0.008 | 0.695±0.051 |
miR-23b | 0.003±0.003 | 0.071±0.065 | 0.126±0.033 | 0.706±0.090 | 0.041±0.011 | 0.537±0.109 |
miR-23 | 0.025±0.002 | 0.501±0.028 | ||||
miR-27a | 0.004±0.003 | 0.074±0.067 | 0.381±0.058 | 0.923±0.038 | 0.116±0.029 | 0.561±0.114 |
miR-27b | 0.004±0.004 | 0.083±0.075 | 0.230±0.046 | 0.859±0.052 | 0.041±0.027 | 0.239±0.113 |
miR-27 | 0.414±0.013 | 0.547±0.030 | ||||
miR-24 | 0.002±0.002 | 0.037±0.035 | 0.464±0.028 | 0.908±0.028 | 0.130±0.016 | 0.760±0.039 |
The consensus sequences were estimated based on human miRNA or loop sequences. miR-23, including miR-23a and miR-23b, was estimated π and Hd based on the dominant miRNA sequences (the loop sequences and another strands would be involved in larger levels of nucleotide divergence).