Table 2.
Details of SSR analysis in 10 species of Zingiberaceae
| Primer | Primer sequence | Approx fragment Size(bp) | Total bands | Polymorphic Bands | Pol (%) | Monomorphic bands | Unique bands | Resolving power | SSR primer index |
|---|---|---|---|---|---|---|---|---|---|
| CBT-02 | F:TCCTCCCTCCCTTCGCCCACTG R:CGATGTTCGCCATGGCTGCTCC | 180 to 2,500 | 47 | 44 | 93.6 | 3 | 7 | 38.18 | 16.82 |
| CBT-03 | F:ATCAGCAGCCATGGCAGCGAC R:AGGGGATCATGTGCCGAAGGC | 100 to 3,000 | 47 | 46 | 97.8 | 1 | 4 | 35.63 | 18.44 |
| CBT-04 | F:ACCCTCTCCGCCTCGCCTCCTC R:CTCCTCCTCCTGCGACCGCTCC | <100 to 2,900 | 52 | 51 | 98.1 | 1 | 5 | 39.45 | 20.23 |
| CBT-05 | F:CTCTGTCTCCTCCCCCGCGTCG R:TCAGCTTCTGGCCGGCCTCCTC | <100 to 3,000 | 49 | 48 | 97.9 | 1 | 13 | 36.72 | 16.13 |
| CBT-06 | F:GCCTCGAGCATCATCATCAG R:ATCAACCTGCACTTGCCTGG | <100 to 3,000 | 42 | 40 | 95.2 | 2 | 20 | 18.36 | 10.51 |
| CBT-07 | F:CGATCCATTCCTGCTGCTCGCG R:CGCCCCCATGCATGAGAAGAG | <100 to >3,000 | 34 | 31 | 91.2 | 3 | 15 | 18.36 | 8.33 |
| CBT-08 | F:CAGCAGATTTTTGCTCCG R:GTCGCGTTCGTGGAAAT | <100 to >3,000 | 33 | 32 | 96.9 | 1 | 6 | 19.63 | 11.37 |
| CBT-09 | F:AGGGGGCAGTGGAGAG R:ACGTTCCTGCACTTGACG | <100 to 1,600 | 21 | 20 | 95.2 | 1 | 3 | 17.45 | 7.07 |
| Total | – | 325 | 312 | – | 13 | 73 | – | – | |
| Mean | – | 40.62 | 39 | 95.7 | 1.6 | 9.1 | 27.97 | 13.6 | |
| Range | <100 to >3,000 | 21–52 | 20–51 | 91–98 | 1–3 | 3–20 | 17.4–39.4 | 7.07–20.23 |