Table 1.
Group | Individuals | Populations | Haplotypes | Haplotype diversity | θ | Average number of differing loci |
---|---|---|---|---|---|---|
Sub-Saharan Africa | 303 | 5 | 300 | 0.99993 | 0.00006 | 16.5 |
North Africa | 452 | 4 | 445 | 0.99992 | 0.00010 | 16.2 |
Middle East | 100 | 1 | 100 | 1.0 | 0 | 15.26 |
Central Asia | 86 | 1 | 80 | 0.99836 | 0.0012 | 16.18 |
South Asia | 661 | 8 | 644 | 0.99992 | 0.00009 | 17.5 |
East Asia | 967 | 7 | 964 | 0.999994 | 0.000006 | 17.3 |
South East Asia | 634 | 6 | 630 | 0.99998 | 0.00002 | 16.6 |
Aboriginal Australian | 100 | 1 | 96 | 0.99919 | 0.00069 | 16.8 |
Native American | 365 | 10 | 357 | 0.99986 | 0.00015 | 17.4 |
Admixed Native American | 764 | 12 | 758 | 0.99998 | 0.00002 | 17.5 |
European | 5,618 | 38 | 5599 | 0.9999988 | 0.000001 | 17.4 |
Migrant Sub-Saharan Africa | 663 | 5 | 659 | 0.99998 | 0.000004 | 16.3 |
Migrant European | 731 | 3 | 730 | 0.999996 | 0.000004 | 17.0 |
Migrant Asian | 649 | 7 | 645 | 0.99998 | 0.00002 | 16.7 |
Bhutana | 78 | 2 | 56 | 0.99434 | 0.00794 | 13.9 |
Biaka Pygmya | 101 | 1 | 94 | 0.99822 | 0.00226 | 17.5 |
Global | 12,272 | 111 | 12,156 | 0.9999985 | 0.00000238 | 16.5 |
Bhutan and Biaka Pygmies were not assigned to a larger geographic group as the individuals sampled were ascertained differently (Bhutan), or are known to have different population characteristics to all other study populations (Biaka, see Materials and Methods and DNA Samples).