Table 3. Nucleotide content and gene count levels of the genome.
Attribute | Value | % of totala |
---|---|---|
Genome size (bp) | 3,098,747 | 100.00 |
DNA coding region (bp) | 2,812,982 | 90.78 |
DNA G+C content (bp) | 1,541,077 | 49.73 |
Total genes | 3,237 | 100.00 |
RNA genes | 54 | 1.67 |
Protein-coding genes | 3,183 | 98.33 |
Genes in paralog clusters | ||
Genes assigned to COGs | 2,523 | 77.94 |
1 or more conserved domains | ||
2 or more conserved domains | ||
3 or more conserved domains | ||
4 or more conserved domains | ||
Genes with signal peptides | 919 | 28.39 |
Genes with transmembrane helices | 654 | 20.20 |
Paralogous groups |
a) The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome.