Table 1. Classification and general features of D. gibsoniae strain GrollT (DSM 7213) according to the MIGS recommendations [5].
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Current classification | Domain Bacteria | TAS [6] | |
Phylum Firmicutes | TAS [6-8] | ||
Class Clostridia | TAS [9,10] | ||
Order Clostridiales | TAS [11,12] | ||
Family Peptococcaceae | TAS [11,13] | ||
Genus Desulfotomaculum | TAS [11,14,15] | ||
Species Desulfotomaculum gibsoniae | TAS [1] | ||
Type strain Groll | |||
Gram stain | Negative with a Gram-positive cell wall structure | TAS [1,2] | |
Cell shape | Straight or slightly curved rods with pointed ends | TAS [1,2] | |
Motility | Motile, but motility was lost during cultivation | TAS [1,2] | |
Sporulation | Spherical and central, slightly swelling the cell | TAS [1,2] | |
Temperature range | 20-40°C | TAS [1,2] | |
Optimum temperature | 35-37°C | TAS [1,2] | |
Carbon source | CO2 (autotrophic) and many organic compounds including aromatic compounds | TAS [1,2] | |
Energy source | Sulfate-dependent growth and fermentative growth with pyruvate, crotonate, formate, H2 + CO2, and methoxylated aromatic compounds |
TAS [1,2] | |
Electron acceptor | Sulfate, thiosulfate and sulfite | TAS [1,2] | |
MIGS-6 | Habitat | Fresh water, mud, soil | TAS [1,2] |
MIGS-6.2 | pH range Optimum pH |
6.0-8.0 6.9-7.2 |
TAS [1,2] |
MIGS-6.3 | Salinity | 0-35 g l-1, no addition of NaCl necessary | TAS [1,2] |
MIGS-22 | Oxygen | Obligate anaerobe | TAS [1,2] |
MIGS-15 | Biotic relationship | Free living | TAS [1,2] |
MIGS-14 | Pathogenicity | BSF 1 [16] | |
MIGS-4 | Geographic location | Grolland, Bremen, Germany | TAS [1,2] |
MIGS-5 | Sample collection time | Spring 1989 | |
MIGS-4.1 | Latitude | 53.058 N | |
MIGS-4.2 | Longitude | 8.762 E | |
MIGS-4.3 | Depth | 60 cm (water), 1 cm sediment |
Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from the Gene Ontology project [17].