Table 1. Classification and general features of Collinsella massiliensis strain GD3T according to the MIGS recommendations [42].
MIGS ID | Property | Term | Evidence codea |
---|---|---|---|
Current classification | Domain Bacteria | TAS [43] | |
Phylum Actinobacteria | TAS [44] | ||
Class Actinobacteria | TAS [45] | ||
Order Coriobacteriales | TAS [45,46] | ||
Family Coriobacteriaceae | TAS [47] | ||
Genus Collinsella | TAS [39] | ||
Species massiliensis | IDA | ||
Type strain GD3T | IDA | ||
Gram stain | Positive | IDA | |
Cell shape | Bacilli | IDA | |
Motility | Non motile | IDA | |
Sporulation | Non spore forming | IDA | |
Temperature range | Mesophilic | IDA | |
Optimum temperature | 37°C | IDA | |
MIGS-6.3 | Salinity | Unknown | NAS |
MIGS-22 | Oxygen requirement | Anaerobic | IDA |
Carbon source | Unknown | NAS | |
Energy source | Unknown | NAS | |
MIGS-6 | Habitat | Human gut | IDA |
MIGS-15 | Biotic relationship | Free living | IDA |
MIGS-14 | Pathogenicity Biosafety level Isolation |
Unknown 2 Human feces |
IDA |
MIGS-4 | Geographic location | France | IDA |
MIGS-5 | Sample collection time | January 2012 | IDA |
MIGS-4.1 | Latitude | 43.296482 | IDA |
MIGS-4.1 | Longitude | 5.36978 | IDA |
MIGS-4.3 | Depth | Surface | IDA |
MIGS-4.4 | Altitude | 0 m above sea level | IDA |
Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [48]. If the evidence is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgements.