Table 1. Classification and general features of M. limicola M3T according to the MIGS recommendations [16] published by the Genomic Standards Consortium [17].
MIGS ID | Property | Term | Evidence code |
---|---|---|---|
Current classification | Domain Bacteria | TAS [18] | |
Phylum Euryarchaeota | TAS [19] | ||
Class Methanomicrobia | TAS [20] | ||
Order Methanomicrobiales | TAS [21-25] | ||
Family Methanomicrobiaceae | TAS [21,22] | ||
Genus Methanoplanus | TAS [1,2] | ||
Species Methanoplanus limicola | TAS [1,2] | ||
Type strain M3 | TAS [1] | ||
Gram stain | negative | TAS [1] | |
Cell shape | plate-like | TAS [1] | |
Motility | weakly motile | TAS [1] | |
Sporulation | not reported | ||
Temperature range | mesophile, 17-41°C | TAS [1] | |
Optimum temperature | 40°C | TAS [1] | |
Salinity | 0.4 - 5.4% NaCl (w/v), optimum 1.0% | TAS [5] | |
MIGS-22 | Oxygen requirement | anaerobe | TAS [1] |
Carbon source | CO2, formate | TAS [1] | |
Energy metabolism | methanogen, chemoorganotrophic | TAS [1] | |
MIGS-6 | Habitat | swamps of fresh water and seawater | TAS [1] |
MIGS-15 | Biotic relationship | free living | TAS [1] |
MIGS-14 | Pathogenicity | none | NAS |
Biosafety level | 1 | TAS [26] | |
MIGS-23.1 | Isolation | mud of drilling swamp | TAS [1] |
MIGS-4 | Geographic location | near Baia, Naples Area, Italy | TAS [1] |
MIGS-5 | Sample collection time | 1981 or earlier | NAS |
MIGS-4.1 | Latitude | 40.629 | NAS |
MIGS-4.2 | Longitude | 14.362 | NAS |
MIGS-4.3 | Depth | not reported | |
MIGS-4.4 | Altitude | not reported |
Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). Evidence codes are from of the Gene Ontology project [27].