Table 3. Human PPIN topological properties of TF-targets vs NON-TF-targets.
Property | Dataset | OCT4 vs NON-OCT4 | SOX2 vs NON-SOX2 | NANOG vs NON-NANOG | ||||||
Average | Average | P | Average | Average | P | Average | Average | P | ||
ASPL | BioGRID | 3.574171 | 3.60704 | 0.2561 | 3.528778 | 3.611939 | 0.0001228 | 3.521464 | 3.614302 | 2.332E-6 |
HPRD | 4.093096 | 4.146839 | 0.1429 | 4.08806 | 4.149418 | 0.02393 | 4.097943 | 4.149802 | 0.04426 | |
Betweenness | BioGRID | 1.75347E-04 | 0.001484981 | 2.439E-04 | 6.74666E-04 | 0.001500916 | 0.1287 | 6.40797E-04 | 0.001520557 | 0.07553 |
HPRD | 2.79325E-04 | 0.0025712 | 1.69E-06 | 0.002882312 | 0.002462086 | 0.8179 | 0.002306237 | 0.002511442 | 0.8878 | |
Closeness | BioGRID | 0.2862341 | 0.290058 | 0.2253 | 0.2919629 | 0.2897727 | 0.424 | 2.92E-01 | 0.289702 | 0.288 |
HPRD | 0.2557632 | 0.2589428 | 0.5414 | 0.2573345 | 0.25895 | 0.6772 | 0.2589372 | 0.2588228 | 0.9757 | |
CC | BioGRID | 0.2101071 | 0.1828742 | 0.08325 | 0.1815801 | 0.1839522 | 0.8099 | 0.1899667 | 0.1831693 | 0.448 |
HPRD | 0.1045342 | 0.1030916 | 0.8997 | 0.09825781 | 0.10352095 | 0.4949 | 0.09893491 | 0.10357138 | 0.5041 | |
Degree | BioGRID | 18.32508 | 20.27829 | 0.316 | 29.69814 | 19.4765 | 0.1185 | 31.10767 | 19.13552 | 0.03128 |
HPRD | 7.855385 | 7.802695 | 0.9331 | 9.27566 | 7.690115 | 0.009551 | 9.070696 | 7.675023 | 0.008655 | |
Eccentricity | BioGRID | 8.198142 | 8.19328 | 0.9039 | 8.131617 | 8.198244 | 0.05012 | 8.136312 | 8.199093 | 3.91E-02 |
HPRD | 9.615385 | 9.573948 | 0.5599 | 9.612903 | 9.572455 | 0.4474 | 9.59293 | 9.573577 | 0.7064 | |
NC | BioGRID | 126.1499 | 119.2906 | 0.5021 | 122.932 | 119.254 | 0.5943 | 130.1599 | 118.4664 | 0.08831 |
HPRD | 39.22931 | 35.4478 | 0.05731 | 37.13338 | 35.45685 | 0.2265 | 36.60404 | 35.47286 | 0.3295 | |
Radiality | BioGRID | 0.7854858 | 0.7821837 | 0.1709 | 0.7889704 | 0.7817751 | 5.68E-05 | 0.7894008 | 0.7815906 | 1.308E-6 |
HPRD | 0.7784053 | 0.7740564 | 0.08891 | 0.7786679 | 0.773859 | 0.01069 | 0.7776415 | 0.7738546 | 0.0332 | |
Stress | BioGRID | 305873.1 | 450004.9 | 0.02379 | 934659.5 | 407185.9 | 0.2534 | 9.08E+05 | 399436.9 | 0.174 |
HPRD | 310804.1 | 357170 | 0.4041 | 447976.2 | 348391.2 | 0.1233 | 417604 | 349232.8 | 0.1987 | |
TC | BioGRID | 0.2021913 | 0.1865986 | 0.1279 | 0.1781781 | 0.1878123 | 0.1652 | 0.1821223 | 0.1876121 | 0.3843 |
HPRD | 0.2013462 | 0.1958896 | 0.6086 | 0.1893462 | 0.1966006 | 0.3103 | 0.1938195 | 0.1963081 | 0.7063 |