Table 5. Analysis of nucleotide sequence identities (%) of RNA1 (lower diagonal) and RNA2 (upper diagonal) segments of SPCSV isolates in this study and those retrieved from the database.
Isolates | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 |
1. Can181-9 | 99.0 | 98.8 | 99.2 | 99.2 | 71.0 | 70.9 | 71.0 | |
2. Chongqing-12-8 | 98.9 | 99.1 | 99.1 | 99.1 | 71.0 | 70.9 | 71.0 | |
3. Jiangsu-2011 | 98.9 | 99.6 | 98.8 | 98.8 | 71.1 | 71.0 | 71.2 | |
4. Sichuan-12-8 | 99.3 | 98.8 | 98.8 | 99.7 | 71.0 | 70.9 | 71.1 | |
5. Sichuan-12-12 | 99.3 | 98.8 | 98.8 | 99.6 | 71.0 | 70.9 | 71.0 | |
6. Guangdong-2011 | 82.6 | 82.5 | 82.5 | 82.5 | 82.6 | 99.7 | 98.3 | |
7. m2-47 | 82.7 | 82.6 | 82.5 | 82.6 | 82.6 | 99.4 | 98.4 | |
8. Uganda | 81.6 | 81.5 | 81.5 | 81.6 | 81.6 | 97.5 | 97.6 |