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. 2014 Aug 29;9(8):e106476. doi: 10.1371/journal.pone.0106476

Table 1. Assembly results of sugarcane transcriptome using trinity software.

Length range Unigene Merge_Unigene
200 bp–300 bp 28,473 (30.85%) 27,684 (27.73%)
300 bp–500 bp 24,852 (26.93%) 24,795 (24.84%)
500 bp–1,000 bp 18,488 (20.03%) 25,254 (25.30%)
1,000 bp–2,000 bp 12,792 (13.86%) 14,383 (14.41%)
2,000+bp 7,692 (8.33%) 7,708 (7.72%)
Total number 92,297 99,824
Total length 70,251,430 bp 77,293,229 bp
N50 length 1,300 bp 1,143 bp
Mean length 761.1453 bp 774.2950 bp

Notes: N50 length is an indicator of measuring assembly effect, which is calculated by the accumulated length of the assembled fragments from long to short. When the sum is greater than or equal to 50% of the total length, the final accumulated fragment length is the N50 value. Mean length = for the average assembly length.