Table 6.
Recombination | GC content | |||||||
---|---|---|---|---|---|---|---|---|
Parameter | Est | P-value | r2 | PCR (%) | Est | P-value | r2 | PCR (%) |
Distance to end | −0.069 | <10−15 | −0.37 | 5.37 | −0.048 | <10−15 | −0.42 | 12.21 |
Chromosome size | −0.036 | <10−15 | −0.21 | 1.89 | −0.037 | <10−15 | −0.37 | 9.34 |
Microsatellites | 0.002 | 0.67 | 0.23 | 5.75 | 0.107 | <10−15 | 0.58 | 13.21 |
Repeat density | −0.001 | 0.81 | 0.01 | 2.60 | −0.059 | <10−15 | −0.11 | 10.24 |
Motif density | 0.061 | <10−15 | 0.38 | 5.78 | 0.133 | <10−15 | 0.65 | 15.40 |
Gene density | 0.022 | 9.0·10−9 | 0.09 | 0.78 | 0.073 | <10−15 | 0.29 | 5.52 |
Total | 22.2 | 65.5 |
Included in the table is also the raw Pearson's pairwise correlation coefficient (r2) between each explanatory variable and recombination rate, and the amount of variation explained by each explanatory variable according to the principal component regression (PCR). Data are from chromosomes >20 Mb.