Table 6.
Proportion of correct classifications by method for each specimen
| ID | E-NET | RANDOM FOREST | DLDA | LASSO | BEST-1 | C.V. | |
|---|---|---|---|---|---|---|---|
| LungCATSC076/TUMOR | 1 | 0.9941 | 0.9822 | 0.9941 | 1.0000 | 0.9704 | 0.0120 |
| LungCATSC094/TUMOR | 2 | 0.9830 | 0.9830 | 0.9943 | 0.9886 | 0.9830 | 0.0052 |
| CircLungCATSC028/TUMOR | 3 | 1.0000 | 0.9593 | 0.9884 | 1.0000 | 0.9651 | 0.0196 |
| LungCATSC098/NL | 4 | 0.9830 | 0.9886 | 0.9886 | 0.9830 | 0.9148 | 0.0328 |
| LungCATSC072/TUMOR | 5 | 0.9887 | 0.9605 | 0.9774 | 0.9774 | 0.9379 | 0.0205 |
| LungCATSC101/TUMOR | 6 | 0.9672 | 0.9672 | 0.9836 | 0.9672 | 0.8962 | 0.0359 |
| LungCATSC074/TUMOR | 7 | 0.9763 | 0.8817 | 0.9941 | 0.9704 | 0.7988 | 0.0893 |
| CircLungCATSC029/NL | 8 | 1.0000 | 0.9846 | 0.9026 | 1.0000 | 0.7026 | 0.1384 |
| CircLungCATSC028/NL | 9 | 0.9748 | 1.0000 | 0.8994 | 0.9686 | 0.7233 | 0.1232 |
| CircLungCATSC025/TUMOR | 10 | 0.9697 | 0.7727 | 0.9596 | 0.9747 | 0.8081 | 0.1095 |
| CircLungCATSC023/TUMOR | 11 | 0.9711 | 0.9653 | 0.9538 | 0.9595 | 0.6012 | 0.1816 |
| LungCATSC092/NL | 12 | 0.8497 | 0.9016 | 0.9378 | 0.8549 | 0.7772 | 0.0701 |
| LungCATSC087/TUMOR | 13 | 0.9055 | 0.8358 | 0.9204 | 0.9005 | 0.6915 | 0.1113 |
| LungCATSC081/NL | 14 | 0.9322 | 0.7627 | 0.6836 | 0.9322 | 0.6328 | 0.1762 |
| LungCATSC087/NL | 15 | 0.7988 | 0.9290 | 0.8462 | 0.7929 | 0.4970 | 0.2115 |
| CircLungCATSC023/NL | 16 | 0.7354 | 0.7725 | 0.7778 | 0.7460 | 0.4497 | 0.1996 |
| LungCATSC121/TUMOR | 17 | 0.7472 | 0.5506 | 0.7921 | 0.7247 | 0.6517 | 0.1364 |
| LungCATSC089/NL | 18 | 0.5529 | 0.8235 | 0.6706 | 0.5412 | 0.6765 | 0.1754 |
| LungCATSC101/NL | 19 | 0.6705 | 0.7443 | 0.5568 | 0.6818 | 0.5966 | 0.1137 |
| LungCATSC072/NL | 20 | 0.6374 | 0.8304 | 0.4678 | 0.6374 | 0.5965 | 0.2051 |
| LungCATSC098/TUMOR | 21 | 0.6213 | 0.8107 | 0.6272 | 0.5799 | 0.4793 | 0.1926 |
| CircLungCATSC027/NL | 22 | 0.5774 | 0.6845 | 0.4881 | 0.5952 | 0.6488 | 0.1255 |
| LungCATSC089/TUMOR | 23 | 0.6850 | 0.5750 | 0.5350 | 0.6650 | 0.5050 | 0.1335 |
| CircLungCATSC029/TUMOR | 24 | 0.6973 | 0.4162 | 0.4919 | 0.6919 | 0.4703 | 0.2380 |
| CircLungCATSC024/NL | 25 | 0.6923 | 0.5621 | 0.6864 | 0.6450 | 0.1479 | 0.4187 |
| LungCATSC081/TUMOR | 26 | 0.6382 | 0.2613 | 0.4422 | 0.6884 | 0.4925 | 0.3359 |
| LungCATSC121/NL | 27 | 0.5000 | 0.4202 | 0.4681 | 0.5000 | 0.4787 | 0.0693 |
| LungCATSC115/TUMOR | 28 | 0.4780 | 0.3297 | 0.4560 | 0.4835 | 0.6099 | 0.2113 |
| LungCATSC115/NL | 29 | 0.4036 | 0.3193 | 0.3373 | 0.3855 | 0.4036 | 0.1059 |
| CircLungCATSC024/TUMOR | 30 | 0.2047 | 0.2632 | 0.4971 | 0.2281 | 0.4854 | 0.4277 |
| PE89/TUMOR | 31 | 0.2934 | 0.1976 | 0.2695 | 0.2814 | 0.3653 | 0.2128 |
| CircLungCATSC027/TUMOR | 32 | 0.0851 | 0.1064 | 0.1436 | 0.0798 | 0.6170 | 1.1189 |
| CircLungCATSC025/NL | 33 | 0.1910 | 0.2079 | 0.1180 | 0.1966 | 0.2416 | 0.2371 |
| LungCATSC092/TUMOR | 34 | 0.0663 | 0.1327 | 0.1990 | 0.0663 | 0.2500 | 0.5692 |
| LungCATSC094/NL | 35 | 0.0684 | 0.1632 | 0.0421 | 0.0737 | 0.2789 | 0.7767 |
A value close to 1 indicates the specimen was almost always classified correctly. The c.v. column indicates the coefficient of variation of the five methods; higher values indicate more variability in the classification of the given observation between methods. Specimen IDs correspond to Figure 4.