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. 2014 Jan 29;32:25–51. doi: 10.3767/003158514X679191

Table 1.

Overview of species and isolates used in this study with their CBS accession numbers, former names and, where applicable, corrected taxon names according to findings in this study.

Species CBS accession nr. Former identification INSDC ITS INSDC TUB INSDC LSU INSDC ACT Substrate Host
Alloconiothyrium aptrootii CBS 980.95T Coniothyrium sp. JX496121 JX496460 JX496234 JX496347 Soil ~
CBS 981.95 Coniothyrium sp. JX496122 JX496461 JX496235 JX496348 Soil ~
Ampelomyces quisqualis CBS 128.79 ~ ~ ~ JX681063 ~ Lesion Cucumber mildew
CBS 129.79 ~ ~ ~ JX681064 ~ Lesion Cucumber mildew
CBS 131.31 ~ ~ ~ JX681066 ~ Lesion Erysiphe cichoracearum on Helianthus tuberosus
CBS 131.79 ~ ~ ~ JX681065 ~ Lesion Cucumber mildew
CBS 133.32 ~ ~ ~ JX681067 ~ Lesion Microsphaera alni on Lonicera sp.
Aplosporella aquifolii CBS 103.68 ~ ~ ~ JX681068 ~ Dead leaf Ilex aquifolium
A. hesperidica CBS 208.37 ~ ~ ~ JX681069 ~ Early stem-end rot Citrus sinensis
A. mali CBS 519.75 ~ ~ ~ JX681070 ~ Fruit Malus sylvestris
A. prunicola CBS 121167 ~ ~ ~ JX681071 ~ Bark Prunus persica var. nucipersica
A. ruborum CBS 117.82 ~ ~ ~ JX681072 ~ Dead stem Rubus sp.
A. sterculiae CBS 342.78 ~ ~ ~ JX681073 ~ ~ Sterculia oblonga
Boeremia exigua var. exigua CBS 431.74 ~ ~ ~ JX681074 ~ Tuber with gangrene Solanum tuberosum
Coniothyrina agaves CBS 470.69 ~ ~ ~ JX681075 ~ Spot on dead leaf Agave americana
Coniothyrium cerealis CBS 157.78 ~ ~ ~ JX681080 ~ Stem Triticum aestivum
CBS 518.74 ~ ~ ~ JX681079 ~ ~ Phleum pratense
Con. juniperi CBS 610.72 ~ ~ ~ JX681081 ~ ~ Juniperus sp.
Con. nitidae CBS 111302 ~ ~ ~ JX681082 ~ ~ Protea nitida
CBS 111321 ~ ~ ~ JX681083 ~ ~ Protea nitida
Con. palmarum CBS 400.71 ~ EU754153 ~ JX681084 ~ Dead petiole Chamaerops humilis
CBS 758.73 ~ EU040225 ~ JX681085 ~ Leaf spots Phoenix dactylifera
EU754154
Con. palmicola CBS 161.37 ~ ~ ~ JX681086 ~ Stem Pandanus tectoriae
Coniothyrium sp. CBS 122.76 ~ ~ ~ JX681077 ~ ~ Cocos nucifera
CBS 302.72 ~ JX496065 JX496404 JX496178 JX496291 Leaf Azalea sp.
CBS 423.92 ~ ~ ~ JX681078 ~ Root Hordeum vulgare
Cucurbidothis pityophila CBS 149.32 ~ ~ ~ JX681087 ~ Root, young tree Picea sp.
Cucurbitaria berberidis CBS 394.84 ~ ~ ~ JX681088 ~ Dead branches Berberis julianae
Dendrothyrium longisporum CBS 582.83T Coniothyrium sp. JX496097 JX496436 JX496210 JX496323 ~ Arceuthobium pusillum
CBS 824.84 Coniothyrium cerealis JX496115 JX496454 JX496228 JX496341 Leaf spot Triticum aestivum
D. variisporum CBS 121517T Coniothyrium sp. JX496030 JX496369 JX496143 JX496256 Declined grape vine Vitis vinifera
CBS 197.82 Coniothyrium sp. JX496053 JX496392 JX496166 JX496279 ~ Erica carnea
Didymella exigua CBS 183.55 ~ EU754155.1 ~ JX681089 ~ ~ Rumex arifolius
Keissleriella cladophila CBS 104.55 ~ ~ ~ JX681090 ~ ~ Smilax parvifolia
Leptosphaeria doliolum subsp. errabunda CBS 541.66 ~ ~ ~ JX681093 ~ Stem Rudbeckia sp.
Leptosphaeria doliolum var. doliolum CBS 297.51 ~ ~ ~ JX681094 ~ ~ Papaver rhoeas
CBS 504.75 ~ ~ ~ JX681095 ~ Stem Urtica dioica
L. maculans CBS 260.94 ~ ~ ~ JX681096 ~ ~ Brassica oleracea
L. australis CBS 100575 ~ ~ ~ JX681099 ~ Soil ~
CBS 939.69 ~ ~ ~ JX681098 ~ Soil ~
Massaria platani CBS 221.37 ~ DQ678065 ~ JX681100 ~ ~ Platanus occidentalis
Microsphaeropsis arundinis CBS 100243 ~ JX496010 JX496349 JX496123 JX496236 Soil ~
M. olivacea CBS 233.77 ~ GU237988 ~ JX681103 ~ Needle Pinus laricio
CBS 303.68 ~ ~ ~ JX681101 ~ Leaf spots Ligustrum vulgare
CBS 432.71 ~ GU237987 ~ JX681102 ~ Dead twig and pod Sarothamnus sp.
Neophaeosphaeria filamentosa CBS 102203 ~ ~ ~ JX681104 ~ ~ Yucca rostrata
Paraconiothyrium africanum CBS 121166T ~ JX496029 JX496368 JX496142 JX496255 ~ Prunus persica
Paracon. archidendri CBS 168.77T Coniothyrium sp. JX496049 JX496388 JX496162 JX496275 Leaf spot Pithecelobium bigeminum
Paracon. brasiliense CBS 100299T ~ AY642531 JX496350 JX496124 JX496237 Fruit Coffea arabica
CBS 115.92 Coniothyrium sp. JX496022 JX496361 JX496135 JX496248 Phyllosphere Olea europaea
CBS 122319 ~ JX496032 JX496371 JX496145 JX496258 ~ ~
CBS 122320 ~ JX496033 JX496372 JX496146 JX496259 Pruning cut Actinidia chinensis var. Hort16A
CBS 122321 ~ JX496034 JX496373 JX496147 JX496260 Browning wood Platanusacerifolia
CBS 122851 ~ JX496036 JX496375 JX496149 JX496262 ~ Juglans regia
CBS 159.60 Coniothyrium sp. JX496044 JX496383 JX496157 JX496270 ~ ~
CBS 254.88 Coniothyrium sp. JX496058 JX496397 JX496171 JX496284 ~ Magnolia sp.
CBS 395.87 Coniothyrium sp. JX496083 JX496422 JX496196 JX496309 Soil ~
CBS 587.84 Coniothyrium sp. JX496099 JX496438 JX496212 JX496325 Bark Vitis vinifera
Paracon. cyclothyrioides CBS 432.75 Coniothyrium sp. JX496088 JX496427 JX496201 JX496314 Soil Hevea brasiliensis
CBS 972.95T ~ JX496119 JX496458 JX496232 JX496345 Soil ~
Paracon. estuarinum CBS 109850T ~ JX496016 JX496355 JX496129 JX496242 Sediment from estuarine habitat ~
Paracon. fuckelii CBS 508.94 Coniothyrium rosarum JX496096 JX496435 JX496209 JX496322 Stem cancer Rosa sp.
CBS 584.69 Coniothyrium fuckelii JX496098 JX496437 JX496211 JX496324 Root of gymnosperm ~
CBS 653.85 Coniothyrium sp. JX496104 JX496443 JX496217 JX496330 Canker Picea abies
CBS 764.71B Paraconiothyrium minitans JX496112 JX496451 JX496225 JX496338 Academic hospital Human
CBS 797.95 Coniothyrium fuckelii JX496113 JX496452 JX496226 JX496339 Dead stem Rubus sp.
Paracon. fungicola CBS 113269T ~ JX496020 JX496359 JX496133 JX496246 Resupinate polypore fungus ~
Paracon. hawaiiense CBS 120025T ~ JX496027 JX496366 JX496140 JX496253 Stem Sophora chrysophylla
Paraconiothyrium sp. CBS 119485 ~ EF055359 ~ ~ ~ Wood Actinidia chinensis var. Hort 16A
CBS 194.82 Coniothyrium sp. JX496052 JX496391 JX496165 JX496278 ~ Lycopodium annotinum
Paraconiothyrium sp. 1 CBS 113682 Microsphaeropsis pseudaspera JX496021 JX496360 JX496134 JX496247 Air sample ~
CBS 251.87 Coniothyrium sp. JX496057 JX496396 JX496170 JX496283 Nail Human
Paracon. variabile CBS 112.72 Coniothyrium sp. JX496019 JX496358 JX496132 JX496245 Dead stem ex herbarium specimen Dianthus sp.
CBS 119486 ~ JX496023 JX496362 JX496136 JX496249 Wood Actinidia chinensis var. Hort 16A
CBS 119633 Paraconiothyrium sp. JX496024 JX496363 JX496137 JX496250 ~ Laurus nobilis
CBS 120014 Paraconiothyrium variabile JX496026 JX496365 JX496139 JX496252 Wood Actinidia chinensis var. Hort 16A
CBS 121163 ~ EU295639 ~ ~ ~ ~ Prunus persica
CBS 121164 ~ JX496028 JX496367 JX496141 JX496254 ~ Prunus persica
CBS 121754 ~ JX496031 JX496370 JX496144 JX496257 ~ Prunus salicina
CBS 122322 Paraconiothyrium sp. JX496035 JX496374 JX496148 JX496261 Pruning cut Actinidia chinensis var Hot16A
CBS 168.69 Paraconiothyrium sporulosum JX496048 JX496387 JX496161 JX496274 Soil Acer pseudoplatanus
CBS 269.74 Coniothyrium sp. JX496060 JX496399 JX496173 JX496286 Desert soil ~
CBS 413.84 Coniothyrium sp. JX496086 JX496425 JX496199 JX496312 Stem and leaf Lepidosperma longitudinale
CBS 433.71 Coniothyrium palmigenum JX496089 JX496428 JX496202 JX496315 Dead leaf Chamaerops humilis
CBS 461.90 Coniothyrium platani JX496093 JX496432 JX496206 JX496319 Pruning wound Platanus acerifolia
CBS 504.84 Coniothyrium sp. JX496095 JX496434 JX496208 JX496321 Teleutosorus Puccinia allii
CBS 638.93 Microsphaeropsis sp. JX496102 JX496441 JX496215 JX496328 Disintegrated calcareous sandstone ~
CBS 680.83 Coniothyrium sp. JX496105 JX496444 JX496218 JX496331 Toe nail Human
CBS 882.70 Coniothyrium sp. JX496118 JX496457 JX496231 JX496344 Dead stem Spartium junceum
Paraphaeosphaeria angularis CBS 167.70T Coniothyrium sp. JX496047 JX496386 JX496160 JX496273 Leaf Saccharum officinarum
Paraph. arecacearum CBS 158.75T Coniothyrium sp. JX496043 JX496382 JX496156 JX496269 Soil Elaeis guineensis
CBS 614.75 Coniothyrium sp. JX496100 JX496439 JX496213 JX496326 Cocos nucifera Cocos nucifera
Paraph. michotii CBS 340.86 Coniothyrium sp. JX496079 JX496418 JX496192 JX496305 Leaf Phragmites australis
CBS 652.86 ~ JX496103 JX496442 JX496216 JX496329 ~ Typha latifolia
Paraph. minitans CBS 111750 Paraconiothyrium minitans JX496017 JX496356 JX496130 JX496243 Sclerotia Sclerotinia sclerotorium, Lucerne
CBS 111752 Paraconiothyrium minitans JX496018 JX496357 JX496131 JX496244 ~ Unknown
CBS 151.96 Paraconiothyrium minitans JX496042 JX496381 JX496155 JX496268 Sclerotia Sclerotinia sclerotiorum
CBS 286.81 Paraconiothyrium minitans JX496063 JX496402 JX496176 JX496289 Stem Solanum tuberosum
CBS 859.71 Paraconiothyrium minitans JX496116 JX496455 JX496229 JX496342 Sclerotium, in soil Sclerotinia trifoliorum
CBS 860.71 Paraconiothyrium minitans JX496117 JX496456 JX496230 JX496343 Sclerotium, in soil Solanum tuberosum
Paraph. neglecta CBS 119637 Paraconiothyrium sporulosum JX496025 JX496364 JX496138 JX496251 Inner ear Human
CBS 124076 Paraconiothyrium sp. JX496037 JX496376 JX496150 JX496263 Wood Actinidia chinensis var. Hort16A
CBS 124077 Paraconiothyrium sp. JX496038 JX496377 JX496151 JX496264 Wood Actinidia chinensis var. Hort16A
CBS 124078 Paraconiothyrium sp. JX496039 JX496378 JX496152 JX496265 Wood Actinidia chinensis var. Hort16A
CBS 180.61 Coniothyrium fuckelii JX496051 JX496390 JX496164 JX496277 Acid mull soil, with very well decomposed leaves ~
CBS 300.72 Coniothyrium sp. JX496064 JX496403 JX496177 JX496290 Leaf Azalea sp.
CBS 303.77 Paraconiothyrium sporulosum JX496067 JX496406 JX496180 JX496293 Taxus baccata Taxus baccata
CBS 305.77 Paraconiothyrium sporulosum JX496070 JX496409 JX496183 JX496296 ~ Taxus baccata
CBS 306.77 Paraconiothyrium sporulosum JX496071 JX496410 JX496184 JX496297 ~ Juniperus chinensis
CBS 307.77 Paraconiothyrium sporulosum JX496072 JX496411 JX496185 JX496298 ~ Cupressocyparis leylandii
CBS 335.78 Coniothyrium sp. JX496076 JX496415 JX496189 JX496302 Decayed wood ~
CBS 337.78 Paraconiothyrium sporulosum JX496077 JX496416 JX496190 JX496303 Rotten wood ~
CBS 359.75 Paraconiothyrium sporulosum JX496081 JX496420 JX496194 JX496307 Canker Juniperus sp.
CBS 431.77 Paraconiothyrium sporulosum JX496087 JX496426 JX496200 JX496313 ~ Unknown
CBS 434.71A Paraconiothyrium minitans JX496090 JX496429 JX496203 JX496316 ~ Erica carnea
CBS 434.71B Paraconiothyrium minitans JX496091 JX496430 JX496204 JX496317 ~ Pyrola rotundifolia
CBS 452.81 Paraconiothyrium sporulosum JX496092 JX496431 JX496205 JX496318 Dead branches Pyrus malus
CBS 627.94 Paraconiothyrium sporulosum JX496101 JX496440 JX496214 JX496327 Decaying leaf Mahonia nervosa
CBS 683.83 Paraconiothyrium sporulosum JX496107 JX496446 JX496220 JX496333 Seed Quercus robur
Paraph. pilleata CBS 102207 ~ JX496013 JX496352 JX496126 JX496239 ~ Juncus roemerianus
Paraph. sardoa CBS 501.71T Coniothyrium sp. JX496094 JX496433 JX496207 JX496320 Dead leaf Smilax aspera
Paraphaeosphaeria sp. CBS 101464 Microsphaeropsis rugosa JX496012 JX496351 JX496125 JX496238 Soil ~
CBS 978.95 Microsphaeropsis sp. JX496120 JX496459 JX496233 JX496346 Soil ~
Paraph. sporulosa CBS 105.76 Paraconiothyrium sporulosum JX496014 JX496353 JX496127 JX496240 Root Picea abies
CBS 109.72 Coniothyrium sp. JX496015 JX496354 JX496128 JX496241 Agricultural soil ~
CBS 146.69 Paraconiothyrium sporulosum JX496040 JX496379 JX496153 JX496266 Agricultural soil ~
CBS 150.32 Coniothyrium rosarum JX496041 JX496380 JX496154 JX496267 ~ Rosa canina
CBS 162.69 Coniothyrium sp. JX496045 JX496384 JX496158 JX496271 Soil ~
CBS 163.69 Coniothyrium sp. JX496046 JX496385 JX496159 JX496272 Soil ~
CBS 177.59 Paraconiothyrium sporulosum JX496050 JX496389 JX496163 JX496276 Artificially inoculated soil ~
CBS 218.68T Paraconiothyrium sporulosum JX496054 JX496393 JX496167 JX496280 Wheat-field soil ~
CBS 221.78 Coniothyrium sp. JX496055 JX496394 JX496168 JX496281 Soil ~
CBS 245.76 Coniothyrium sp. JX496056 JX496395 JX496169 JX496282 ~ ~
CBS 271.78 Coniothyrium sp. JX496061 JX496400 JX496174 JX496287 Rhizosphere of grass ~
CBS 281.81 Coniothyrium sp. JX496062 JX496401 JX496175 JX496288 ~ Clematis sp.
CBS 302.77 Coniothyrium sp. JX496066 JX496405 JX496179 JX496292 ~ Calluna vulgaris
CBS 304.80 Coniothyrium sp. JX496068 JX496407 JX496181 JX496294 Root Malus sylvestris
CBS 305.68 Microsphaeropsis olivacea JX496069 JX496408 JX496181 JX496295 ~ Opuntia sp.
CBS 308.81 Coniothyrium sp. JX496073 JX496412 JX496186 JX496299 Soil, potato field Solanum tuberosum
CBS 317.81 Paraconiothyrium sporulosum JX496074 JX496413 JX496187 JX496300 River water ~
CBS 329.76 Coniothyrium sp. JX496075 JX496414 JX496188 JX496301 ~ Picea abies
CBS 340.85 Coniothyrium sp. JX496078 JX496417 JX496191 JX496304 Cyst, buried in soil Globodera rostochiensis
CBS 391.86 Coniothyrium sp. JX496082 JX496421 JX496195 JX496308 ~ Triticum aestivum
CBS 401.71 Coniothyrium sp. JX496084 JX496423 JX496197 JX496310 ~ Fragaria vesca
CBS 688.70B Paraconiothyrium sporulosum JX496108 JX496447 JX496221 JX496334 Soil ~
CBS 688.70C Paraconiothyrium sporulosum JX496109 JX496448 JX496222 JX496335 Soil ~
CBS 690.70 Coniothyrium fuckelii JX496110 JX496449 JX496223 JX496336 ~ Secale cereale
CBS 764.71A Paraconiothyrium minitans JX496111 JX496450 JX496224 JX496337 Greenhouse soil ~
CBS 824.68 Coniothyrium cydoniae JX496114 JX496453 JX496227 JX496340 Leaf spot Cydonia oblonga
Paraph. verruculosa CBS 263.85 Coniothyrium sp. JX496059 JX496398 JX496172 JX496285 Needle Picea abies
CBS 354.80 Coniothyrium sp. JX496080 JX496419 JX496193 JX496306 Páramo soil, after burning ~
CBS 682.84 Coniothyrium sp. JX496106 JX496445 JX496219 JX496332 Wood Pinus radiata
Paraph. viridescens CBS 854.73T Coniothyrium sp. JX496085 JX496424 JX681076 JX496311 Fresh water ~
Parastagonospora nodorum CBS 272.59 ~ ~ ~ JX681114 ~ Grain Triticum aestivum
CBS 273.59 ~ ~ ~ JX681115 ~ Leaf Triticum aestivum
CBS 287.52 ~ ~ ~ JX681113 ~ Decaying straw Triticum aestivum
Peyronellaea glomerata CBS 528.66 ~ ~ ~ JX681105 ~ Wood cutting Chrysanthemum
Phaeocytostroma plurivorum CBS 113835 ~ ~ ~ JX681106 ~ ~ Helianthus annuus
P. sacchari CBS 275.34 ~ ~ ~ JX681107 ~ ~ Unknown
Phaeosphaeria avenaria f.sp. triticae CBS 289.52 ~ ~ ~ JX681108 ~ Leaf Triticum aestivum
CBS 385.86 ~ ~ ~ JX681109 ~ ~ Triticum aestivum
P. brevispora CBS 120248 ~ ~ ~ JX681110 ~ Culms Sasa sp.
P. eustoma CBS 307.71 ~ ~ ~ JX681111 ~ ~ Juncus alpinus
CBS 724.92 ~ ~ ~ JX681112 ~ ~ Ramalina sp. (lichen)
P. occulta CBS 582.86 ~ ~ ~ JX681116 ~ ~ Carex hirta
P. parvula CBS 260.49 ~ ~ ~ JX681117 ~ Dead leaf Iris pseudacorus
CBS 605.86 ~ ~ ~ JX681118 ~ ~ Iris pseudacorus
Phaeosphaeriopsis obtusispora CBS 246.64 ~ ~ ~ JX681119 ~ Dead leaf Aloe arborescens
Plenodomus lingam (syn. Leptosphaeria maculans) CBS 147.24 ~ ~ JX681097 ~ ~ Unknown
Plenodomus biglobosus (syn. Leptosphaeria biglobosa) CBS 475.81 ~ ~ JX681091 ~ Leaf spots Brassica oleracea
CBS 476.81 ~ ~ JX681092 ~ Black leaf spots Brassica oleracea
Pleospora herbarum var. herbarum CBS 191.86 ~ ~ ~ JX681120 ~ Leaf Medicago sativa
Thyridaria rubronotata CBS 385.39 ~ ~ ~ JX681121 ~ ~ Acer sp.

* GenBank accession numbers of ITS, TUB, LSU and ACT sequences (starting with ‘JX’ for newly generated sequences in this study), substrate, and host organism. ‘T’ following the CBS accession number indicates ex-type strains.