Table 4.

Weighted mean and standard deviation of r², a measure of linkage disequilibrium, between pairs of SNPs

Bina	Interval size between SNP pairs	Whole genome level
		Average r2	SD
1	0–1 kbp	0.320	0.327
2	1–10 kbp	0.244	0.284
3	10–20 kbp	0.178	0.232
4	20–30 kbp	0.142	0.198
5	30–40 kbp	0.169	0.187
6	40–50 kbp	0.176	0.194
7	50–60 kbp	0.157	0.178
8	60–70 kbp	0.082	0.132
9	70–80 kbp	0.177	0.194
10	80–90 kbp	0.067	0.113
11	90–100 kbp	0.160	0.182
12	100–200 kbp	0.174	0.193
13	~300 kbp	0.164	0.183
14	~400 kbp	0.023	0.041
15	~500 kbp	0.020	0.035
16	~600 kbp	0.019	0.031
17	~700 kbp	0.018	0.029
18	~800 kbp	0.017	0.028
19	~900 kbp	0.017	0.027
20	~1,000 k(1Mb)	0.016	0.026
21	~2 Mb	0.015	0.023
22	~3 Mb	0.014	0.021
23	~4 Mb	0.013	0.020
24	~5 Mb	0.013	0.019
25	~6 Mb	0.012	0.018
26	~7 Mb	0.012	0.017
27	~8 Mb	0.011	0.017
28	~9 Mb	0.011	0.016
29	~10 Mb	0.010	0.015

SNP, single nucleotide polymorphism; SD, standard deviation.

^aThe r² values for pairs of SNPs were binned according to the physical distance separating the two SNPs.