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. 2014 Sep 1;5:372. doi: 10.3389/fpls.2014.00372

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Copyright © 2014 Sperschneider, Ying, Dodds, Gardiner, Upadhyaya, Singh, Manners and Taylor.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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For the gene family of protein PGTG_08638, diversifying selection is only detected for the orthologs. A phylogenetic tree for the gene family of PGTG_08638 was predicted using PhyML and branch support values are shown. PAML detects site-specific diversifying selection only for the branch with the three orthologs (stem rust PGTG 08638, stripe rust PSTG_14557, leaf rust PTTG 06270), but not for the other variants PGTG_08639 and PGTG_08644 and their orthologs.