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. 2014 Aug 22;7:52. doi: 10.1186/1755-8794-7-52

Table 1.

The information of the 24 sites that were directly sequenced and the genotypes of analysed individuals

 
 
 
 
PRNP mutation
E200K
E200K
E200K
E200K
WT
E200K
E200K
E200K
WT
E200K
WT
E200K
WT
E200K
WT
WT
WT
WT
WT
WT
E219K
WT
WT
WT
WT
        Sample ID Patient no. 1 Patient no. 2 Patient no. 3 Family no. 1 Family no. 2 Family no. 3 Family no. 4 Family no. 5 Family no. 6 Family no. 7 Family no. 8 Family no. 9 Family no. 10 Family no. 11 Family no. 12 Normal no. 1 Normal no. 2 Normal no. 3 Normal no. 4 Normal no. 5 Normal no. 6 Normal no. 7 Normal no. 8 Normal no. 9 Normal no. 10
Variants filtering strategy
Chr.
Position
Gene
Year of birth Ref./Obs.
1948
non-descript
1935
1927
1950
1952
1955
1957
1962
1969
1971
1975
1977
1981
1983
1969
1975
1976
1977
1980
1982
1983
1983
1984
1987
Filtering strategy 1
1
27,268,000
NUDC
G/A
GG
GG
GG
GA
GG
GA
GA
GA
GG
GG
GG
GG
GG
GA
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
1
42,049,603
HIVEP3
C/T
CC
CC
CC
CT
CT
CC
CC
CC
CT
CC
CC
CC
CC
CC
CC
CC
CT
CC
CC
CC
CC
CC
CC
CC
CC
2
64,199,317
VPS54
G/A
GG
GG
GG
GA
GG
GG
GA
GA
GA
GG
GG
GG
GA
GA
GG
GG
GG
GA
GG
GG
GG
GG
GG
GG
GG
2
233,346,498
ECEL1
C/T
CC
CC
CC
CT
CC
CC
CC
CC
CT
CC
CC
CC
CC
CC
CC
CC
CT
CC
CC
CT
CT
CC
CC
CC
CC
3
124,896,625
SLC12A8
A/G
AA
AA
AA
AG
AG
AA
AG
AG
AA
AA
AA
AA
AG
AG
AG
AA
AA
AA
AA
AA
AA
AA
AA
AA
AA
4
187,153,290
KLKB1
C/T
CC
CC
CC
CT
CC
CC
CT
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
5
139,884,478
ANKHD1-EIF4EBP3
G/C
GG
GG
GG
GC
GG
GG
GG
GG
GC
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
6
159,185,617
SYTL3
T/C
TT
TT
TT
TC
TC
TC
TT
TC
TT
TT
TT
TT
TT
TC
TC
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
8
2,088,717
MYOM2
G/T
GG
GG
GG
GT
GT
GT
GT
GG
GT
GG
GG
GG
GT
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
9
18,950,859
FAM154A
C/T
CC
CC
CC
CT
CT
CT
CT
CC
CT
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
10
24,831,649
KIAA1217
C/T
CC
CC
CC
CT
CT
CT
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
11
27,016,411
FIBIN
A/G
AA
AA
AA
AG
FL
AA
AG
AG
AG
AA
AA
AA
AA
AG
AA
AA
AA
AG
AA
AA
AA
AA
AA
AA
AG
11
36,250,774
LDLRAD3
G/T
GG
GG
GG
GT
GG
GT
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
11
64,453,195
NRXN2
C/A
CC
CC
CC
CA
CC
CA
CA
CA
CC
CC
CC
CC
CC
CA
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
13
39,588,100
PROSER1
G/A
GG
GG
GG
GA
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
16
75,669,878
KARS
A/G
AA
AA
AA
AG
AG
AA
AA
AG
AA
AA
AA
AA
AA
AA
AG
AA
AA
AA
AA
AA
AA
AA
AA
AA
AA
17
59,489,425
C17orf82
C/G
CC
CC
CC
CG
CG
CG
CC
CG
CG
CC
CC
CC
CC
CC
CG
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
18
21,485,578
LAMA3
G/C
GG
GG
GG
GC
GC
GC
GC
GG
GC
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
GG
19
4,359,190
MPND
C/T
CC
CC
CC
CT
CT
CT
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
Filtering strategy 2
17
45,219,336
CDC27
T/A
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
19
501,786
MADCAM1
C/A
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
CC
19
50,510,999
VRK3
A/T
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
19
50,511,000
C/T
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
TT
  19 52,096,053 AC018755.11 T/A TA TA TA AA TA TA TA TA TA AA TA TT TA TA TA AA TA TA TT AA TT TA TA TA TT