Table 2.
First author | Genotype (N) | Allele frequency (N) | MAF | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Case | Control | Case | Control | ||||||||||
Total | AA | AB | BB | Total | AA | AB | BB | A | B | A | B | ||
rs20417 | |||||||||||||
Gao 2014 [20] | 465 | 394 | 67 | 4 | 799 | 719 | 76 | 4 | 855 | 75 | 1514 | 84 | 0.08 |
Piranda 2010 [16] | 308 | 157 | 127 | 24 | 264 | 129 | 117 | 18 | 441 | 175 | 375 | 153 | 0.28 |
Dossus 2010 [21] | 6254 | 4394 | 1646 | 214 | 8092 | 5694 | 2166 | 232 | 10434 | 2074 | 13554 | 2630 | 0.17 |
Gao 2007 [23] | 601 | 526 | 73 | 2 | 643 | 582 | 59 | 2 | 1125 | 77 | 1223 | 63 | 0.06 |
Cox 1 2007 [24] | 1243 | 865 | 336 | 42 | 1715 | 1185 | 485 | 45 | 2066 | 420 | 2855 | 575 | 0.17 |
Shen 2006 [27] | 1067 | 670 | 387 | 1105 | 691 | 414 | — | — | — | — | — | ||
rs689466 | |||||||||||||
Brasky 2011 [19] | 1077 | 660 | 271 | 34 | 1910 | 1199 | 471 | 54 | 1591 | 339 | 2869 | 579 | 0.18 |
Piranda 2010 [16] | 289 | 224 | 62 | 3 | 245 | 190 | 51 | 3 | 510 | 68 | 431 | 57 | 0.12 |
Dossus 2010 [21] | 6247 | 4020 | 1928 | 299 | 8115 | 5143 | 2562 | 410 | 9968 | 2526 | 12848 | 3382 | 0.20 |
Gao 2007 [23] | 601 | 121 | 305 | 175 | 643 | 150 | 327 | 166 | 547 | 655 | 627 | 659 | 0.54 |
rs5275 | |||||||||||||
Gao 2014 [20] | 465 | 299 | 132 | 34 | 799 | 515 | 244 | 40 | 730 | 200 | 1274 | 324 | 0.22 |
Fawzy 2013 [18] | 160 | 53 | 71 | 36 | 150 | 69 | 67 | 14 | 177 | 143 | 205 | 95 | 0.45 |
Brasky 2011 [19] | 1077 | 432 | 447 | 108 | 1910 | 732 | 782 | 226 | 1311 | 663 | 2246 | 1234 | 0.31 |
Piranda 2010 [16] | 294 | 125 | 149 | 20 | 244 | 120 | 99 | 25 | 399 | 189 | 339 | 149 | 0.32 |
Dossus 2010 [21] | 6133 | 2697 | 2664 | 772 | 7946 | 3512 | 3501 | 933 | 8058 | 4208 | 10525 | 5367 | 0.34 |
Abraham 2009 [22] | 2172 | 927 | 985 | 260 | 2265 | 996 | 1010 | 259 | 2839 | 1505 | 3002 | 1528 | 0.35 |
Gao 2007 [23] | 601 | 404 | 179 | 18 | 643 | 429 | 194 | 20 | 987 | 215 | 1052 | 234 | 0.18 |
Cox 1 2007 [24] | 1249 | 541 | 567 | 141 | 1720 | 699 | 808 | 213 | 1649 | 849 | 2206 | 1234 | 0.34 |
Cox 2 2007 [24] | 301 | 140 | 131 | 30 | 610 | 270 | 259 | 81 | 411 | 191 | 799 | 421 | 0.32 |
Cox 3 2007 [24] | 644 | 281 | 296 | 67 | 651 | 278 | 294 | 79 | 858 | 430 | 850 | 452 | 0.33 |
Vogel 2007 [25] | 361 | 167 | 150 | 44 | 361 | 155 | 165 | 41 | 484 | 238 | 475 | 247 | 0.33 |
Langsenlehner 2006 [26] | 500 | 214 | 224 | 62 | 500 | 234 | 232 | 33 | 652 | 348 | 700 | 298 | 0.35 |
Shen 2006 [27] | 1060 | 475 | 585 | 1102 | 467 | 635 | — | — | — | — | — |
A represents the major allele; B represents the minor allele. MAF: minor allele frequencies.