Figure 2. Categorization of Hfq-binding RNAs based on deep sequencing. Hfq-binding RNAs were categorized as (A) full-length RNAs, (B) antisense RNAs, (C) intraRNAs, or (D) intergenic RNAs. Annotated coding features (ORFs or RNAs) are represented as arrows and identified intervals are represented as bars. Dark gray elements indicate Hfq-enrichment, while white elements indicate non-enrichment; light gray indicates that an element can be either Hfq-enriched or non-enriched. The wavy line represents the predicted Hfq-binding RNA. For more details see Materials and Methods.