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. 2014 Sep 3;9(9):e106290. doi: 10.1371/journal.pone.0106290

Table 1. Major features of the included studies.

Study Location Number Age (mean) Cancer Type Follow-up (months) Materials Detection Method Measurement Hypomethylation Cut-off Rate (%) Quality Score
JM Bae 2011 Korea 198 59 GC 46(1–72) tumor tissue Pyrosequencing LINE-1 dichotomy 55.79 17
Alu dichotomy 17.37
ZZ Zhu 2011 USA 722 72 all cancers 85(2–118) blood Pyrosequencing LINE-1 dichotomy 68.1 17
Alu dichotomy 26.0
F Ohka 2011 Japan 54 59 GBM 172.8(8.9–336.8) tumor tissue Pyrosequencing LINE-1 dichotomy 63.5 15
F Ohka 2011 Japan 57 42 LGG 172.8(8.9–336.8) tumor tissue Pyrosequencing LINE-1 dichotomy 68.9 15
H Shigaki 2012 Japan 203 70 GC 34.8(13.6–56) tumor tissue Pyrosequencing LINE-1 dichotomy 72.3 17
Y Aoki 2012 Japan 81 67.5 MM 20(3–40) bone marrow BSP LINE-1 dichotomy 41.7 14
Alu dichotomy 37.1
Sat-alphaα dichotomy 39.8
S Hoshimoto 2012 USA 126 63.4 Melanoma 70(3–140) tumor tissue MSP LINE-1 dichotomy 32 15
L Sigalotti 2011 Italy 42 54 Melanoma 15.3(11.0–31.5) tissue-cell culture Pyrosequencing LINE-1 dichotomy 31.13 16
K Saito 2010 Japan 379 48 NSCLC 45.5(2-149) tumor tissue BSP LINE-1 dichotomy 81 18
S Fabris 2011 Italy 81 65 CLK 24(12-120) blood Pyrosequencing Alu dichotomy 21.4 15
Sat-alphaα dichotomy 84.0
K Nosho 2009 USA 2068 65.6 CRC 144(24–312) tumor tissue Pyrosequencing LINE-1 dichotomy 61.50 18
CS Zhang 2011 China 95 49.86 HCC 25(0–50) tumor tissue Q-MSP LINE-1 dichotomy 75.5 16
YY Rhee 2012 Korea 207 55 CRC 46(1–76) tumor tissue Pyrosequencing LINE-1 dichotomy 53 20
Alu dichotomy 18.60
J PATTAMADILOK 2008 Thailand 59 50 OC 59(0–108) tumor tissue COBRA LINE-1 dichotomy 34.87 17
A Murata 2013 Japan 74 65 CRC 46.8(50.4–144) tumor tissue Pyrosequencing LINE-1 dichotomy 52.80 18
S Iwagami 2013 Japan 217 65.9 ESCC 31.2(3–66) tumor tissue Pyrosequencing LINE-1 quatile 65.10 19
CS Furniss 2008 USA 193 59 HNSCC 36(0–60) tumor tissue COBRA LINE-1 dichotomy 45 15
Z Xv 2010 China 105 50 HCC 20(0–40) tumor tissue MSP LINE-1 dichotomy 74.65 16
Annek Q 2012 USA 243 55 BC 7.5(0–15) tumor tissue AQAMA LINE-1 quatile 18.5 16
S Ogino2008 USA 243 NA CRC 60(0–120) tumor tissue Pyrosequencing LINE-1 quatile 45 17

Abbreviations: MSP = Methylation-specific PCR; Q-MSP = Quantitive MSP; BSP = bisulfite sequencing PCR; COBRA = Combined bisulfite restriction analysis ; GC = Gastric Cancer;; GBMs = Glioblastoma Multiformes; LGG = Glioblastoma Glioblastoma multiformes; MM = Multiple Myeloma; NSCLC = Non-Small Cell Lung Cancer; CRC = Colorectal cancer; HCC = Hepatocellular Carcinoma; HNSCC = Head and Neck Squamous Cell Carcinomas; CLL = chronic lymphocytic leukemia; ESCC = Esophageal Squamous Cell Carcinoma; OC = Ovarian Cancer; BC = Breast Cancer; CLK = chronic lymphocytic leukemia.