Table 1. Listing of predicted B. malayi NMT substrates.
B. malayi locus | Myristoylation motif | Score | Protein information | C. elegans homolog |
Bm1_33335 | GGNNSTPKSDTMMDHQP | 3.982 | hypothetical protein | F46C8.3 |
Bm1_01010 | GCTMSQEERAALERSRM | 3.961 | guanine nucleotide-binding protein G-o protein alpha subunit | C26C6.2 * |
Bm1_20595 | GNYKSRPPSSCADELKK | 3.617 | Protein kinase domain containing protein | C24A1.3a * |
Bm1_07670 | GGRQSSQVSHEVAQSEV | 3.327 | cytochrome C-type heme lyase | T06D8.6 * |
Bm1_36040 | GNCFSGSPRQSSPSSDI | 2.626 | SRC-1, putative | Y92H12A.1 * |
Bm1_54125 | GNSGSTNIPGGGTEGYH | 2.584 | golgi reassembly stacking protein 2, putative | Y42H9AR.1 |
Bm1_51340 | GSCQSQEAQEQLARNKA | 2.509 | Guanine nucleotide-binding protein alpha-3 subunit, putative | C34D1.3 * |
Bm1_52520 | GQQQSGFGGKREDRGGG | 2.411 | Probable 26S protease regulatory subunit 4 | F29G9.5 * |
Bm1_44925 | GNALCCLQDSSSAARSK | 2.368 | cyclin fold protein 1 variant b | ZK353.1b |
Bm1_35125 | GCVNSIDQNAKARSKQI | 2.304 | GTP-binding regulatory protein alpha chain - starfish, putative | T07A9.7 |
Bm1_03585 | GQIASIRRRASVPNVTN | 2.205 | hypothetical protein | C11H1.3 * |
Bm1_15680 | GSSQSYEESNRSDDLPK | 1.780 | hypothetical protein | M176.3 * |
Bm1_01525 | GQERSILSRKSQNTIEM | 1.736 | hypothetical protein | F54B11.5 |
Bm1_53985 | GASLTSPLPHRPPTSVC | 1.705 | hypothetical protein Bm1_53985 | T23F11.3b |
Bm1_32000 | GNGQSSNDTNIPSSHSF | 1.704 | hypothetical protein | F59E12.11 * |
Bm1_45820 | GGRCSRRAPSPTHPKLS | 1.688 | Protein kinase domain containing protein | ZK909.2h * |
Bm1_26080 | GQFLSTTASVDEESILR | 1.646 | Glutaredoxin family protein | ZK121.1a * |
Bm1_16785 | GNTGSSLTDLNLFSKGG | 1.635 | calcium and integrin binding family member 2 | F30A10.1 * |
Bm1_28345 | GAYLSKPITEKISECGG | 1.596 | Protein phosphatase 2C containing protein | T23F11.1 |
Bm1_34880 | GAATSGLQSQMQQEHDP | 1.384 | LD28933p | F20D1.1 |
Bm1_31655 | GQQQSAFVVEIASSRFG | 1.301 | hypothetical protein | Y67A10A.7 |
Bm1_07365 | GKAGSKVKNYSKIKKNN | 1.146 | TLD family protein | K08E7.1 * |
Bm1_41730 | GSCLGKKSSTTILEAVH | 0.948 | protein-tyrosine kinase | F49B2.5 * |
Bm1_38795 | GLTISGLFGRLFGKKQV | 0.755 | ADP-ribosylation factor 4 | F57H12.1 * |
Bm1_55795 | GTRLSVSLEDPEVSPRT | 0.189 | Probable NADH-ubiquinone oxidoreductase B18 subunit | D2030.4 * |
Bm1_04790 | GISTSMQKDSTVLSCYG | 0.183 | Platelet-activating factor acetylhydrolase | C52B9.7a * |
Bm1_46940 | GNAAGSIKRSKSIGTWI | 0.105 | hypothetical protein | C52A11.2 * |
Bm1_12460 | GNLFGKQRPALTPVSQQ | 0.076 | FLJ11749-like | Y65B4A.3 * |
Bm1_28970 | GTTIAIKRKGTGESGKS | −0.192 | G-protein alpha subunit, putative | C26C6.2 * |
Bm1_51315 | GICQSQEEKTMVAKSRA | −0.743 | Guanine nucleotide-binding protein alpha-3 subunit, putative | E02C12.5 * |
Bm1_36120 | GIKSSKPKLSKEDLDFL | −0.798 | Neuronal calcium sensor 2 | F10G8.5 * |
Bm1_17230 | GNRESSTSLTSLTSLIS | −0.812 | Ubiquitin carboxyl-terminal hydrolase family protein | ZK328.1b * |
Bm1_54455 | GKLLSKIFGKREMRILM | −1.097 | ADP-ribosylation factor 6 | B0336.2 * |
Bm1_39660 | GNMEASGREMDNPDAEE | −1.101 | map kinase activated protein kinase protein 2, isoform b | F42G8.3b * |
Bm1_43750 | GAKISSETLIEENTYLR | −1.488 | RIKEN cDNA 4933427L07 | C47D12.2 * |
Bm1_49765 | GADGGTIPKRCELVKKK | −1.607 | chromosome 20 open reading frame 43 | C01A2.5 * |
Bm1_50685 | GALLATPACISSLACCC | −1.798 | TDE2 protein | Y57E12AL.1a* |
Bm1_18185 | GNNQGGLHKRERALDGQ | −1.911 | 5′-AMP-activated protein kinase, beta subunit | Y47D3A.15 |
Survey of potential targets for N-terminal glycine myristoylation in B. malayi. Predicted myristoylated proteins in the proteome of C. elegans (145 clusters) were retrieved from MYRbase and used to query the B. malayi genome. Homologs with a BLASTP E-Value <e−10 were analyzed using the MYR predictor [55] to predict myristoylation sites. Protein sequences that were scored as “Reliable” with a positive score or “Twilight zone” with a negative score were retained and duplicates were discarded. C. elegans homologs that showed any abnormal phenotype in WormBase were marked with *. Unlikely candidates such as multi-pass integral membrane proteins were removed.