Table 2.
Positively and negatively selected sites of the Loreto outbreak DENV-2 viruses
Gene | Length | dN/dS (95% confidence interval) | Number of positively selected sites | Number of negatively selected sites | |
---|---|---|---|---|---|
Strong positive (dN/dS) > 1 × 1010 | Slightly positive (dN/dS) < 10 | ||||
Total | 3,391 | 0.066 (0.061–0.072) | 67 | 35 | 1,920 |
C* | 114 | 0.151 (0.102–0.214) | 2 | 3 | 42 (37%) |
prM | 166 | 0.074 (0.051–0.101) | 2 | 3 | 93 (56%) |
Envelope | 495 | 0.066 (0.053–0.082) | 8 | 7 | 274 (55%) |
NS1 | 352 | 0.074 (0.057–0.095) | 5 | 2 | 201 (57%) |
NS2a* | 218 | 0.109 (0.086–0.135) | 7 | 1 | 136 (62%) |
NS2b | 130 | 0.061 (0.039–0.090) | 7 | 0 | 67 (52%) |
NS3 | 618 | 0.040 (0.031–0.051) | 10 | 4 | 366 (59%) |
NS4a | 149 | 0.074 (0.051–0.102) | 2 | 4 | 90 (60%) |
NS4b | 249 | 0.044 (0.031–0.061) | 6 | 0 | 143 (57%) |
NS5 | 900 | 0.068 (0.058–0.080) | 18 | 11 | 508 (56%) |
Elevated dN/dS values.