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. 2014 Jul 23;289(36):25199–25210. doi: 10.1074/jbc.M114.568436

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© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

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FIGURE 6. — Superposition of MxiC (colored in orange, Protein Data Bank code 2VJ4) on pCopN (colored as in Fig. 5A). The r.m.s. deviation after an overall superposition is 3.9 Å (239 Cαs compared; top), whereas the r.m.s. deviation after a motif-based superposition is 2.8 Å for the first helical repeat (86 Cαs compared), 1.8 Å for the second (90 Cαs compared), and 2.3 Å for the third (91 Cαs compared) (bottom). The lower r.m.s. deviation as compared with that after superposition of the structures as a whole reflects the flexibility at the junction between the repeated motifs.