Table 2. RNA-Seq reads mapped to NCBI mouse genome build 37 using TopHat.
Control | SMA | |||||
Sample 1 | Sample 2 | Sample 3 | Sample 1 | Sample 2 | Sample 3 | |
Total Reads | 29,763,880 | 14,863,496 | 36,877,629 | 37,203,080 | 32,327,505 | 44,570,352 |
Reads Removed | 23.86% | 22.74% | 23.65% | 29.20% | 28.81% | 28.16% |
Reads Mapped | 74.49% | 75.50% | 74.88% | 69.33% | 69.67% | 70.60% |