Table 1.
Peptide group | Allele no.* | Nucleotide position | Distribution by source** | No. of ST | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
64 | 111 | 210 | 257 | 276 | 324 | 408 | 438 | 486 | SW | DM | P | |||
1 | A | G | C | C | G | A | G | C | A | 26 | 27 | 22 | 26 | |
4 | . | . | . | . | . | . | . | . | . | 2 | 14 | 6 | 6 | |
5 | . | . | . | . | . | . | . | . | . | 3 | 12 | 10 | 11 | |
7 | . | . | . | . | . | . | . | . | . | 45 | 8 | 16 | 11 | |
11 | . | . | . | . | . | . | A | . | . | 26 | 10 | 22 | ||
12 | . | . | . | . | . | . | . | . | . | 1 | 1 | |||
13 | . | . | . | . | . | . | . | . | . | 3 | 4 | 5 | ||
16 | . | . | . | . | . | . | . | . | . | 4 | 2 | |||
18 | . | . | . | . | . | . | . | . | . | 1 | 1 | |||
19 | . | . | . | . | . | . | . | . | . | 6 | 1 | |||
31 | . | . | . | . | . | . | . | . | . | 22 | 1 | 11 | ||
1 | 36 | . | . | . | . | . | . | . | . | . | 5 | 5 | ||
39 | . | . | . | . | . | . | A | . | . | 1 | 1 | |||
40 | . | . | . | . | . | . | A | . | . | 13 | 8 | |||
41 | . | . | . | . | . | . | A | . | . | 3 | 3 | |||
56 | . | . | . | . | . | . | A | . | . | 3 | 2 | |||
66 | . | . | . | . | . | . | A | . | . | 1 | 1 | |||
73 | . | . | . | . | . | . | . | . | . | 1 | 1 | |||
74 | . | . | . | . | . | . | . | . | . | 1 | 1 | |||
75 | . | . | T | . | . | . | . | . | . | 1 | 1 | |||
76 | . | . | . | . | . | . | . | . | . | 2 | 1 | |||
79 | . | . | . | . | . | . | A | . | . | 1 | 1 | |||
80 | . | . | . | . | . | . | . | . | . | 1 | 1 | |||
2 | . | . | . | T | . | . | . | . | . | 3 | 3 | |||
3 | . | . | . | T | . | . | . | . | . | 9 | 3 | 6 | 9 | |
8 | . | . | . | T | . | . | . | . | . | 14 | 17 | 13 | 14 | |
2 | 15 | . | . | . | T | . | . | . | . | . | 2 | 2 | ||
17 | . | . | . | T | . | . | . | . | . | 2 | 2 | |||
30 | . | . | . | T | . | . | . | . | . | 3 | 1 | 4 | ||
44 | . | . | . | T | . | . | . | . | . | 2 | 2 | |||
3 | 6 | G | . | . | . | . | . | . | . | . | 1 | 1 | ||
9 | G | . | . | T | . | . | . | . | . | 2 | 2 | 20 | 11 | |
4 | 53 | G | . | . | T | . | . | . | . | . | 1 | 1 | ||
78 | G | . | . | T | . | . | . | . | . | 1 | 1 | |||
10 | G | . | . | . | . | . | . | . | . | 7 | 4 | 6 | 10 | |
5 | 23 | G | . | . | . | . | . | . | . | . | 1 | 1 | ||
27 | G | . | . | . | . | . | . | . | . | 1 | 1 | |||
6 | 14 | . | . | . | . | . | . | . | . | . | 1 | 1 | ||
8 | 24 | G | . | . | T | . | . | . | . | . | 1 | 1 | 2 | |
14 | 54 | . | A | T | . | A | G | A | T | G | 1 | 1 | ||
55 | . | A | T | . | A | G | A | T | G | 2 | 1 | |||
301 | 301 | . | T | T | . | A | . | . | A | . | 1 | 1 |
*Nucleotide allele number, **SW = Surface water, DM = Domesticated Mammals, P = Poultry.