Table I.
Primers Used in the ChIP assay of the CCL5 Promoter
| Primer Name | Forward Primer | Reverse Primer | Position from TSS | Amplicon Length |
|---|---|---|---|---|
| ChIP1 | 5′ CAC CAT TCA CAC ACA TG 3′ | 5′ GTC AAG GGA TCT GAT AGG 3′ | −983 to −765 | 218bp |
| ChIP2 | 5′ CCT ATC AGA TCC CTT GAC 3′ | 5′ CTT AGT GTG TGA CAT GTG 3′ | −782 to −629 | 153bp |
| ChIP3 | 5′ CAC ATG TCA CAC ACT AAG 3′ | 5′ CCA TAT CAG AAA CAG ACC AC 3′ | −646 to −499 | 147bp |
| ChIP4 | 5′ GTG GTC TGT TTC TGA TAT GG 3′ | 5′ GTT AAG GTC AAG CCA TTG G 3′ | −518 to −392 | 126bp |
| ChIP5 | 5′ GTG AAG ACC AAT GGC TTG 3′ | 5′ CTC TGG CCA AAT ACA GTA GG 3′ | −417 to −271 | 146bp |
| ChIP6 | 5′ CCT ACT GTA TTT GGC CAG AG 3′ | 5′ CCA AAC ACT TGT TGC TGT C 3′ | −288 to −156 | 132bp |
| ChIP7 | 5′ CCT ACT TGC CTT AAG AC 3′ | 5′ GAC TCT GCC TCT AAC TG 3′ | −386 to −228 | 158bp |
| ChIP8 | 5′ CAG TTA GAG GCA GAG TC 3′ | 5′ CAG GAC TTG GGG AGT 3′ | −244 to −127 | 117bp |
| ChIP9 | 5′ ACT CCC CAA GTC CTG 3′ | 5′ GAT GCA TGT GCT GTC TCA G 3′ | −141 to −24 | 117bp |
| ChIP1 | 5′ CAC CAT TCA CAC ACA TG 3′ | 5′ GTC AAG GGA TCT GAT AGG 3′ | −983 to −765 | 218bp |
Primers are listed based on their distance from the TSS (transcription start site). The ChIP 7 primers cover the two EBS included in the ChIP5 and ChIP6 primers.